RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CAMK2GQ13555 558 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SPDL1Q96EA4 605 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 DRG1Q9Y295 367 aaKnown RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 BRWD3Q6RI45 1802 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 CYP2F1P24903 491 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 RFC2P35250 354 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 GRM5P41594 1212 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 MRPS25P82663 173 aaKnown RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 TUSC3Q13454 348 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SLC26A7Q8TE54 656 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 PNMA5Q96PV4 448 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 C11orf84Q9BUA3 381 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 ASPSCR1Q9BZE9 553 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 FRMD3A2A2Y4 597 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 CFLARO15519 480 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 KCNA2P16389 499 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 LIG3P49916 1009 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 ZNF438Q7Z4V0 828 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 LRRC52Q8N7C0 313 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 ARVCFO00192 962 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ATP9AO75110 1047 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ITGALP20701 1170 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 THOP1P52888 689 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ACAP1Q15027 740 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 SETMARQ53H47 684 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 C9orf57Q5W0N0 161 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 RSPH1Q8WYR4 309 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 TCF25Q9BQ70 676 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ATP13A1Q9HD20 1204 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ZMYND8Q9ULU4 1186 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 COL22A1Q8NFW1 1626 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD12Q6UB98 2062 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 FGF10O15520 208 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 RARGP13631 454 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 RAB30Q15771 203 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 TTC39BQ5VTQ0 682 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 TMEM161BQ8NDZ6 487 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 LENG9Q96B70 501 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 OR1D2P34982 312 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 NCKAP1LP55160 1127 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 SLC6A3Q01959 620 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 MTF1Q14872 753 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 G3BP2Q9UN86 482 aaKnown RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 FAM83EQ2M2I3 478 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD20A4Q4UJ75 823 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD20A8PQ5CZ79 823 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD20A2Q5SQ80 823 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 ANKRD20A1Q5TYW2 823 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 EXD1Q8NHP7 514 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 BTBD6Q96KE9 485 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 CCDC3Q9BQI4 270 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 NXF3Q9H4D5 531 aaKnown RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 PLAGL2Q9UPG8 496 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 RPN2P04844 631 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 SNRPD1P62314 119 aaKnown RBP11.08□□□□□ -0.64
PTCH1-206ENST00000421141 IRAK1BP1Q5VVH5 260 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 CDT1Q9H211 546 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 MYL2P10916 166 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 CTSEP14091 401 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 PRKAA1Q13131 559 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 PEX6Q13608 980 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 CASP8Q14790 479 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 MUM1Q2TAK8 710 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 RNF186Q9NXI6 227 aa11.08□□□□□ -0.64
PTCH1-206ENST00000421141 SOCS7O14512 581 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 SRP72O76094 671 aaKnown RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 MTA2O94776 668 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 CSE1LP55060 971 aaKnown RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 BCL2L1Q07817 233 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 KCNT1Q5JUK3 1230 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 ANO5Q75V66 913 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 NAT9Q9BTE0 207 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 TASP1Q9H6P5 420 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 KPNA3O00505 521 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 NOS2P35228 1153 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 PLA2G4AP47712 749 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 TRMT10CQ7L0Y3 403 aaKnown RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 MTBPQ96DY7 904 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 LRRC40Q9H9A6 602 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 PSD3Q9NYI0 1048 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 DOCK2Q92608 1830 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 A0A0A6YYK5 440 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 PBLDP30039 288 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-206ENST00000421141 MRFAP1Q9Y605 127 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 A0A1B0GUL6 1792 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 LAMB1P07942 1786 aa11.07□□□□□ -0.64
PTCH1-206ENST00000421141 C1QTNF3-AMACRE9PGA6 284 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms