RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 DENND4CQ5VZ89 1909 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 A0A1W2PRU2 124 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 GRID2IPA4D2P6 1211 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ZNF197O14709 1029 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 BUB1BO60566 1050 aaPredicted RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 TBX10O75333 385 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 PROSCO94903 275 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ENDOD1O94919 500 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 TBX18O95935 607 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 GJA1P17302 382 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 TFE3P19532 575 aaPredicted RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SULT1E1P49888 294 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 CYP4F8P98187 520 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ACAP1Q15027 740 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SLC5A9Q2M3M2 681 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SLC25A52Q3SY17 297 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 HECTD3Q5T447 861 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SH3PXD2AQ5TCZ1 1133 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 MSANTD2Q6P1R3 559 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 BNIPLQ7Z465 357 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SLFN11Q7Z7L1 901 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ARFGAP1Q8N6T3 406 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 NIPA2Q8N8Q9 360 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 MRPS31Q92665 395 aaKnown RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 TBCBQ99426 244 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ADAM7Q9H2U9 754 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
TMEM53-206ENST00000420706 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 ALG6Q9Y672 507 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 OBSL1O75147 1896 aa13.04□□□□□ -0.32
TMEM53-206ENST00000420706 C2orf78A6NCI8 922 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 TMEM110-MUSTN1A8MSY1 372 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 M0QYT0 321 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 TLR5O60602 858 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 PALMO75781 387 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 TRUB2O95900 331 aaKnown RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 OAS1P00973 400 aaKnown RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 IGLV3-25P01717 112 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 ATP5C1P36542 298 aaKnown RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 TUBP50607 506 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 ATP11AP98196 1134 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 ITIH3Q06033 890 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 EFEMP1Q12805 493 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 EIF4EBP2Q13542 120 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 TEAD2Q15562 447 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 CCDC85BQ15834 202 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 CDO1Q16878 200 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 RAB6CQ53S08 254 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 OTUD1Q5VV17 481 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 TXNDC8Q6A555 127 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 C11orf63Q6NUN7 778 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 STRADAQ7RTN6 431 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 CPNE8Q86YQ8 564 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 LRRC57Q8N9N7 239 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 PGAP3Q96FM1 320 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 CDK5RAP1Q96SZ6 601 aaKnown RBP13.03□□□□□ -0.32
TMEM53-206ENST00000420706 RNF38Q9H0F5 515 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 RAB6CQ9H0N0 254 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 GOLPH3Q9H4A6 298 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
TMEM53-206ENST00000420706 C2orf16Q68DN1 1984 aa13.02□□□□□ -0.32
TMEM53-206ENST00000420706 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 SOBPA7XYQ1 873 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 MDM4O15151 490 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 COCHO43405 550 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 KIF5CO60282 957 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 RNF8O76064 485 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 OLFM2O95897 454 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 F9P00740 461 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 FOSL2P15408 326 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 PFKLP17858 780 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 COMTP21964 271 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 MSNP26038 577 aaKnown RBP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 GBP1P32455 592 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 MAN1A1P33908 653 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 SLC1A1P43005 524 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 ATXN1P54253 815 aaKnown RBP13.02□□□□□ -0.33
TMEM53-206ENST00000420706 DEUP1Q05D60 604 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 ZNF569Q5MCW4 686 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 ATAT1Q5SQI0 421 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 C10orf120Q5SQS8 335 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 POTEHQ6S545 545 aa13.02□□□□□ -0.33
TMEM53-206ENST00000420706 DAAM2Q86T65 1068 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms