RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CBWD3Q5JTY5 395 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 CBWD5Q5RIA9 395 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 C10orf76Q5T2E6 689 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 ARHGAP17Q68EM7 881 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 SDE2Q6IQ49 451 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 ZNF513Q8N8E2 541 aaPredicted RBP22.43■■□□□ 1.18
PTPN4-202ENST00000420482 TERB1Q8NA31 727 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 ANKRD52Q8NB46 1076 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 CEP63Q96MT8 703 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 DCLK3Q9C098 648 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 NMUR1Q9HB89 426 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 DNAJC17Q9NVM6 304 aaKnown RBP22.43■■□□□ 1.18
PTPN4-202ENST00000420482 OSER1Q9NX31 292 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 STRIP2Q9ULQ0 834 aa22.43■■□□□ 1.18
PTPN4-202ENST00000420482 MAP1BP46821 2468 aaKnown RBP22.42■■□□□ 1.18
PTPN4-202ENST00000420482 KIR2DL1P43626 348 aaPredicted RBP22.42■■□□□ 1.18
PTPN4-202ENST00000420482 LIMK1P53667 647 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 CREB5Q02930 508 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 CCDC40Q4G0X9 1142 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 SGO2Q562F6 1265 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 RSRC2Q7L4I2 434 aaKnown RBP22.42■■□□□ 1.18
PTPN4-202ENST00000420482 MIB1Q86YT6 1006 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 MDGA1Q8NFP4 955 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 TATDN2Q93075 761 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 MARK1Q9P0L2 795 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 KIAA1257Q9ULG3 409 aa22.42■■□□□ 1.18
PTPN4-202ENST00000420482 CHD8Q9HCK8 2581 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 BICDL2A1A5D9 508 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 SGK1O00141 431 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 CACNG3O60359 315 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 ADRB1P08588 477 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 TYRP14679 529 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 CHKAP35790 457 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 BCAT1P54687 386 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 SF3A2Q15428 464 aaKnown RBP22.41■■□□□ 1.18
PTPN4-202ENST00000420482 PLA2G2CQ5R387 149 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 TPGS1Q6ZTW0 290 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 PGBD3Q8N328 593 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 PHTF2Q8N3S3 785 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 ERCC4Q92889 916 aaPredicted RBP22.41■■□□□ 1.18
PTPN4-202ENST00000420482 SLC35C1Q96A29 364 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 ARID3AQ99856 593 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 RASAL2Q9UJF2 1139 aa22.41■■□□□ 1.18
PTPN4-202ENST00000420482 CIZ1Q9ULV3 898 aaPredicted RBP22.41■■□□□ 1.18
PTPN4-202ENST00000420482 TRIM49BA6NDI0 452 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 DCLK1O15075 740 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 MAP3K13O43283 966 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 CD19P15391 556 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 PMS1P54277 932 aaKnown RBP22.4■■□□□ 1.18
PTPN4-202ENST00000420482 MESP2Q0VG99 397 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 CCDC6Q16204 474 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 EMC10Q5UCC4 262 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 PMS2CLQ68D20 193 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 TMEM92Q6UXU6 159 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 SCD5Q86SK9 330 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 PIGZQ86VD9 579 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 WBP2Q969T9 261 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 LRRC4Q9HBW1 653 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 NUDT5Q9UKK9 219 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 STARD13Q9Y3M8 1113 aa22.4■■□□□ 1.18
PTPN4-202ENST00000420482 GDF9O60383 454 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 GREM1O60565 184 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 CAVIN2O95810 425 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 NTSR1P30989 418 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 DGKGP49619 791 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 TKTL1P51854 596 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 YWHAGP61981 247 aaKnown RBP eCLIP22.39■■□□□ 1.17
PTPN4-202ENST00000420482 BST2Q10589 180 aaKnown RBP22.39■■□□□ 1.17
PTPN4-202ENST00000420482 EFEMP1Q12805 493 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 E2F5Q15329 346 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 GOLGA7BQ2TAP0 167 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 RAB41Q5JT25 222 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 SFTPA1Q8IWL2 248 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 HMGB4Q8WW32 186 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 IPO9Q96P70 1041 aaKnown RBP22.39■■□□□ 1.17
PTPN4-202ENST00000420482 OLA1Q9NTK5 396 aaKnown RBP22.39■■□□□ 1.17
PTPN4-202ENST00000420482 TSPAN16Q9UKR8 245 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 INVSQ9Y283 1065 aa22.39■■□□□ 1.17
PTPN4-202ENST00000420482 TCRBV21S2A2A0A5A6 115 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 BCLAF3A2AJT9 711 aaKnown RBP22.38■■□□□ 1.17
PTPN4-202ENST00000420482 XPO1O14980 1071 aaKnown RBP22.38■■□□□ 1.17
PTPN4-202ENST00000420482 MDM4O15151 490 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 STC2O76061 302 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 ZBED1O96006 694 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 CYBBP04839 570 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 VDRP11473 427 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 HOXB2P14652 356 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 FMO5P49326 533 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 PPM1JQ5JR12 505 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 ISM2Q6H9L7 571 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 FOXR2Q6PJQ5 311 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 LPCAT2Q7L5N7 544 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 CYP2U1Q7Z449 544 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 NT5C1BQ96P26 610 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 MARCH2Q9P0N8 246 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 MAN1B1Q9UKM7 699 aa22.38■■□□□ 1.17
PTPN4-202ENST00000420482 MYOFQ9NZM1 2061 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 PMM2O15305 246 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 P4HA2O15460 535 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 ADAM23O75077 832 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms