RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PSEN1P49768 467 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 ARHGAP8P85298 464 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 PDE4CQ08493 712 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 PLA2G2CQ5R387 149 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 PM20D1Q6GTS8 502 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 DGLUCYQ7Z3D6 616 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 MIB1Q86YT6 1006 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TERB1Q8NA31 727 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TXNDC5Q8NBS9 432 aaKnown RBP11.61□□□□□ -0.55
SSBP3-206ENST00000420121 MDGA1Q8NFP4 955 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TSTD1Q8NFU3 115 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 CCDC26Q8TAB7 109 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 KAT5Q92993 513 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 CNOT6LQ96LI5 555 aaKnown RBP11.61□□□□□ -0.55
SSBP3-206ENST00000420121 ZSWIM1Q9BR11 485 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TPSD1Q9BZJ3 242 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 ARRDC1-AS1Q9H2J1 176 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 METTL14Q9HCE5 456 aaKnown RBP11.61□□□□□ -0.55
SSBP3-206ENST00000420121 CD248Q9HCU0 757 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 DNMT3LQ9UJW3 386 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 NAGPAQ9UK23 515 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TSPAN16Q9UKR8 245 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
SSBP3-206ENST00000420121 MUC22E2RYF6 1773 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 RNF225M0QZC1 329 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 O00370 1275 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 BIN1O00499 593 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 KLF8O95600 359 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 CISD3P0C7P0 127 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 PLA2G4AP47712 749 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 DGKEP52429 567 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 LRMPQ12912 555 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 SF3A2Q15428 464 aaKnown RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 CCDC6Q16204 474 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 GOLGA7BQ2TAP0 167 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 ANO4Q32M45 955 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 C10orf120Q5SQS8 335 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 ANO7Q6IWH7 933 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 KLHL10Q6JEL2 608 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 NELFBQ8WX92 580 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 TFAP2BQ92481 460 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 NDRG1Q92597 394 aaKnown RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 MED15Q96RN5 788 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 NACA2Q9H009 215 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 RXFP3Q9NSD7 469 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
SSBP3-206ENST00000420121 FBXO10Q9UK96 956 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 INVSQ9Y283 1065 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 PI4KAP42356 2102 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 CKAP5Q14008 2032 aa11.6□□□□□ -0.55
SSBP3-206ENST00000420121 PRRT4C9JH25 899 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 NEDD8-MDP1E9PL57 170 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 XPO1O14980 1071 aaKnown RBP11.59□□□□□ -0.55
SSBP3-206ENST00000420121 CALCAP01258 141 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 ZNF806P0C7X5 589 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 TYRP14679 529 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 BCKDHBP21953 392 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 PPP1R2P41236 205 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 TKTL1P51854 596 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 BCAT1P54687 386 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 MARSP56192 900 aaKnown RBP11.59□□□□□ -0.55
SSBP3-206ENST00000420121 STX17P56962 302 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 STIM1Q13586 685 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 HSF5Q4G112 596 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-206ENST00000420121 SGO2Q562F6 1265 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 PMS2CLQ68D20 193 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 TPGS1Q6ZTW0 290 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 TOGARAM2Q6ZUX3 1019 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 ACOX2Q99424 681 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 ULBP1Q9BZM6 244 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 DEC1Q9P2X7 70 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 LSM7Q9UK45 103 aaKnown RBP11.59□□□□□ -0.55
SSBP3-206ENST00000420121 CDV3Q9UKY7 258 aaKnown RBP11.59□□□□□ -0.55
SSBP3-206ENST00000420121 CTNND2Q9UQB3 1225 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 STARD13Q9Y3M8 1113 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 PCDHGA5Q9Y5G8 931 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 GON4LQ3T8J9 2241 aa11.59□□□□□ -0.55
SSBP3-206ENST00000420121 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 A0A1W2PQF6 199 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 DCDC2BA2VCK2 349 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 TBC1D3BA6NDS4 549 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 SLC30A4O14863 429 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 P4HA2O15460 535 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 ZBED1O96006 694 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 PENKP01210 267 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 RALAP11233 206 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 VDRP11473 427 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 TBXAS1P24557 533 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 MPLP40238 635 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 P2RY2P41231 377 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 ZNF132P52740 706 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 YWHAGP61981 247 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 BST2Q10589 180 aaKnown RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 EFEMP1Q12805 493 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms