RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 RARGP13631 454 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 TYRP14679 529 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 NTSR1P30989 418 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 PSEN1P49768 467 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 NOVA1P51513 510 aaKnown RBP18.21■□□□□ 0.51
PTCD1-202ENST00000419981 ST3GAL2Q16842 350 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 MAP7D1Q3KQU3 841 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 SPDYCQ5MJ68 293 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 C10orf120Q5SQS8 335 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 KRT39Q6A163 491 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 ARMCX6Q7L4S7 300 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 SCAND2PQ9GZW5 306 aaPredicted RBP18.21■□□□□ 0.51
PTCD1-202ENST00000419981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTCD1-202ENST00000419981 MARK1Q9P0L2 795 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 MBD1Q9UIS9 605 aaPredicted RBP18.21■□□□□ 0.51
PTCD1-202ENST00000419981 DNMT3LQ9UJW3 386 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 NAGPAQ9UK23 515 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 NUDT5Q9UKK9 219 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 STARD13Q9Y3M8 1113 aa18.21■□□□□ 0.51
PTCD1-202ENST00000419981 MDM4O15151 490 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 GABRG2P18507 467 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 PLA2G4AP47712 749 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 KIF11P52732 1056 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 IRX4P78413 519 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 SHC2P98077 582 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 EDRF1Q3B7T1 1238 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 ZNF394Q53GI3 561 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 TRIM61Q5EBN2 209 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 PPP1R26Q5T8A7 1209 aaPredicted RBP18.2■□□□□ 0.5
PTCD1-202ENST00000419981 EGFLAMQ63HQ2 1017 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 CCDC186Q7Z3E2 898 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 TADA2BQ86TJ2 420 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 NUSAP1Q9BXS6 441 aaKnown RBP18.2■□□□□ 0.5
PTCD1-202ENST00000419981 DUSP16Q9BY84 665 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 GOLPH3LQ9H4A5 285 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 EVLQ9UI08 416 aaPredicted RBP18.2■□□□□ 0.5
PTCD1-202ENST00000419981 HCN2Q9UL51 889 aa18.2■□□□□ 0.5
PTCD1-202ENST00000419981 EPG5Q9HCE0 2579 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 ZBTB24O43167 697 aaPredicted RBP18.19■□□□□ 0.5
PTCD1-202ENST00000419981 AP5Z1O43299 807 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 KRT37O76014 449 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 ZNF202O95125 648 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 RALAP11233 206 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 GTF2H1P32780 548 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 DPP6P42658 865 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 WASP42768 502 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 PTGER3P43115 390 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 MXI1P50539 228 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 LMAN2Q12907 356 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 LYSMD4Q5XG99 296 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 SDE2Q6IQ49 451 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 Q6ZNB5 142 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 MIB1Q86YT6 1006 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 SYT12Q8IV01 421 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 CHPFQ8IZ52 775 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 ZNF276Q8N554 614 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 TTC39CQ8N584 583 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 CCDC34Q96HJ3 373 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 CDK5RAP1Q96SZ6 601 aaKnown RBP18.19■□□□□ 0.5
PTCD1-202ENST00000419981 ATXN2Q99700 1313 aaKnown RBP18.19■□□□□ 0.5
PTCD1-202ENST00000419981 CHD8Q9HCK8 2581 aa18.19■□□□□ 0.5
PTCD1-202ENST00000419981 NYNRINQ9P2P1 1898 aaKnown RBP18.18■□□□□ 0.5
PTCD1-202ENST00000419981 CDX4O14627 284 aaPredicted RBP18.18■□□□□ 0.5
PTCD1-202ENST00000419981 STC2O76061 302 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 EPB41P11171 864 aaKnown RBP18.18■□□□□ 0.5
PTCD1-202ENST00000419981 DGKGP49619 791 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 RPL6Q02878 288 aaKnown RBP18.18■□□□□ 0.5
PTCD1-202ENST00000419981 SH3PXD2AQ5TCZ1 1133 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 SLC36A4Q6YBV0 504 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 TOGARAM2Q6ZUX3 1019 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 SCD5Q86SK9 330 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 FBXL13Q8NEE6 735 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 FAXDC2Q96IV6 333 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 HEXIM2Q96MH2 286 aaKnown RBP18.18■□□□□ 0.5
PTCD1-202ENST00000419981 TMEM74BQ9NUR3 256 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 CLIC5Q9NZA1 410 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 USP3Q9Y6I4 520 aa18.18■□□□□ 0.5
PTCD1-202ENST00000419981 A0A1W2PQF6 199 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 PRRT4C9JH25 899 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 GIPC1O14908 333 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 STX10O60499 249 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 MCCD1P59942 119 aaPredicted RBP18.17■□□□□ 0.5
PTCD1-202ENST00000419981 ZNF252P-AS1Q0IIN9 211 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 UAP1L1Q3KQV9 507 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
PTCD1-202ENST00000419981 IPO4Q8TEX9 1081 aaKnown RBP18.17■□□□□ 0.5
PTCD1-202ENST00000419981 SEMA4DQ92854 862 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 BHMTQ93088 406 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 EEF2KMTQ96G04 330 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 TMEM176AQ96HP8 235 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 ACOX2Q99424 681 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 GABRG3Q99928 467 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 CISHQ9NSE2 258 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 RASAL2Q9UJF2 1139 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 ZNF510Q9Y2H8 683 aa18.17■□□□□ 0.5
PTCD1-202ENST00000419981 CACNA1EQ15878 2313 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms