RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SLC24A5Q71RS6 500 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 BHLHA9Q7RTU4 235 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 RTN4RL1Q86UN2 441 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 METTL23Q86XA0 190 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 TDRPQ86YL5 185 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 DEFB106AQ8N104 65 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 SIX6OS1Q8N1H7 587 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 RSAD2Q8WXG1 361 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 RSPH1Q8WYR4 309 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 P3H4Q92791 437 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 MYLPFQ96A32 169 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 CENPTQ96BT3 561 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 OLFM3Q96PB7 478 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 MED10Q9BTT4 135 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 FTHL17Q9BXU8 183 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ULBP1Q9BZM6 244 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 POPDC2Q9HBU9 364 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 LRRC4Q9HBW1 653 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 SAGE1Q9NXZ1 904 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 SAE1Q9UBE0 346 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 ZMYND8Q9ULU4 1186 aaPredicted RBP9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 PCDHB8Q9UN66 801 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 SHROOM3Q8TF72 1996 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 LTBP2Q14767 1821 aa9.42□□□□□ -0.9
LINCMD1-201ENST00000418518 NUP205Q92621 2012 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 HACD1B0YJ81 288 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 ARVCFO00192 962 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 NRP1O14786 923 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CHADO15335 359 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 RGS16O15492 202 aaPredicted RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 FKTNO75072 461 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 ACSL3O95573 720 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 IFNB1P01574 187 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 FYNP06241 537 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 LSP1P33241 339 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CDK7P50613 346 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 TKTL1P51854 596 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 ZNF135P52742 658 aaPredicted RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 BCAR1P56945 870 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 MAP3K7CLP57077 242 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 MAGOHP61326 146 aaKnown RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 SEMA3BQ13214 749 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 MAPRE1Q15691 268 aaKnown RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 ZSCAN26Q16670 478 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 KYNUQ16719 465 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CLLU1OSQ5K130 101 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 PM20D1Q6GTS8 502 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 SCYL2Q6P3W7 929 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 NPNTQ6UXI9 565 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CENPUQ71F23 418 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CDKL3Q8IVW4 592 aaPredicted RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CCDC185Q8N715 623 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 EPS8L3Q8TE67 593 aaKnown RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 QKIQ96PU8 341 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 FRMD8Q9BZ67 464 aaPredicted RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 TRPV6Q9H1D0 765 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 DHX35Q9H5Z1 703 aaKnown RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 ELAC1Q9H777 363 aaKnown RBP9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 SAYSD1Q9NPB0 183 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 PAK5Q9P286 719 aa9.41□□□□□ -0.9
LINCMD1-201ENST00000418518 A0A087WUV0 522 aaPredicted RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 E7EVH7 732 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 B4GALT3O60512 393 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 CDH16O75309 829 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 GCATO75600 419 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 B3GAT3O94766 335 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 TMEM63AO94886 807 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 POMCP01189 267 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 LTFP02788 710 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 SELPP16109 830 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 ATP5DP30049 168 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 GRK4P32298 578 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 HPDP32754 393 aaPredicted RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 BRCC3P46736 316 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 HCAR3P49019 387 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 NDUFV1P49821 464 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 ATP1A2P50993 1020 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 CACNA2D1P54289 1103 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 ARL4CP56559 192 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 PITX1P78337 314 aaPredicted RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 DPYSQ14117 519 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 HIF1AQ16665 826 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC45A4Q5BKX6 768 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 DNAJC21Q5F1R6 531 aaKnown RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 NCBP2-AS2Q69YL0 99 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 OVOS1Q6IE37 1185 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 DARS2Q6PI48 645 aaKnown RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 GLB1LQ6UWU2 654 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 HFE2Q6ZVN8 426 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 GPRIN1Q7Z2K8 1008 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms