RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PARP9Q8IXQ6 854 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 ARHGAP18Q8N392 663 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 WDTC1Q8N5D0 677 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 SHDQ96IW2 340 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 NAP1L5Q96NT1 182 aaPredicted RBP11.04□□□□□ -0.64
RFC1-203ENST00000418436 LHX5Q9H2C1 402 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 HEBP1Q9NRV9 189 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 GKN1Q9NS71 199 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 FAM207AQ9NSI2 230 aaPredicted RBP11.04□□□□□ -0.64
RFC1-203ENST00000418436 NAGPAQ9UK23 515 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 CPQQ9Y646 472 aa11.04□□□□□ -0.64
RFC1-203ENST00000418436 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 YJEFN3A6XGL0 299 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 E7ENQ6 273 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 TBX18O95935 607 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 LCP1P13796 627 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 CYP11B1P15538 503 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 RGS7P49802 495 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 POLR2FP61218 127 aaKnown RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 YWHAGP61981 247 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFC1-203ENST00000418436 NR1I3Q14994 352 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 PDGFRLQ15198 375 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 CC2D1AQ6P1N0 951 aaPredicted RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 LRSAM1Q6UWE0 723 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 TMEM110Q86TL2 294 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 DDX42Q86XP3 938 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFC1-203ENST00000418436 SIX6OS1Q8N1H7 587 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 NEK11Q8NG66 645 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 CSGALNACT1Q8TDX6 532 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 IRGQQ8WZA9 623 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 NDRG1Q92597 394 aaKnown RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 CDK5RAP1Q96SZ6 601 aaKnown RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 C8orf33Q9H7E9 229 aaPredicted RBP11.03□□□□□ -0.64
RFC1-203ENST00000418436 TBC1D17Q9HA65 648 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 SMPD4Q9NXE4 827 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 CYTH4Q9UIA0 394 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 ZNF318Q5VUA4 2279 aa11.03□□□□□ -0.64
RFC1-203ENST00000418436 A0A1W2PQC6 194 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 KANSL1LA0AUZ9 987 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 E2F8A0AVK6 867 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 OTOL1A6NHN0 477 aaPredicted RBP11.02□□□□□ -0.65
RFC1-203ENST00000418436 MAN2B1O00754 1011 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 GREM1O60565 184 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 FBXO21O94952 628 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 RALAP11233 206 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 AOC1P19801 751 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 CDH5P33151 784 aaPredicted RBP11.02□□□□□ -0.65
RFC1-203ENST00000418436 SOX5P35711 763 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 ACADSBP45954 432 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 TPM4P67936 248 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PRR20EP86478 221 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PRR20CP86479 221 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PRR20DP86480 221 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PRR20BP86481 221 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PRR20AP86496 221 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 TNK2Q07912 1038 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PDCLQ13371 301 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 RUNX3Q13761 415 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 EML3Q32P44 896 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 ITPRIPL2Q3MIP1 535 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 FILIP1LQ4L180 1135 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 BSPRYQ5W0U4 402 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 TRIM68Q6AZZ1 485 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 TPRG1Q6ZUI0 275 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 TADA2BQ86TJ2 420 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 SUGP1Q8IWZ8 645 aaKnown RBP11.02□□□□□ -0.65
RFC1-203ENST00000418436 MSANTD3Q96H12 275 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
RFC1-203ENST00000418436 OSBPL6Q9BZF3 934 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 LINC00597Q9H2U6 94 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 MFSD1Q9H3U5 465 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 EBF3Q9H4W6 596 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 NLRC4Q9NPP4 1024 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
RFC1-203ENST00000418436 CFAP97Q9P2B7 532 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 DNMT3LQ9UJW3 386 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 WNT6Q9Y6F9 365 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 PIAS3Q9Y6X2 628 aa11.02□□□□□ -0.65
RFC1-203ENST00000418436 GOLGA6L19H0YKK7 550 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 PIK3R2O00459 728 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
RFC1-203ENST00000418436 MDM4O15151 490 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 PAPSS1O43252 624 aaPredicted RBP11.01□□□□□ -0.65
RFC1-203ENST00000418436 PI15O43692 258 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 DXOO77932 396 aaKnown RBP11.01□□□□□ -0.65
RFC1-203ENST00000418436 GFPT2O94808 682 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 SERPINC1P01008 464 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 ARSAP15289 507 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 AVPR2P30518 371 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 KRT9P35527 623 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 STAT1P42224 750 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 IFNAR2P48551 515 aa11.01□□□□□ -0.65
RFC1-203ENST00000418436 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
RFC1-203ENST00000418436 ZNF445P59923 1031 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms