RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CYTH1Q15438 398 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF829Q3KNS6 432 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC30A10Q6XR72 485 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SCAIQ8N9R8 606 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 FEZF2Q8TBJ5 459 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 NLRP7Q8WX94 980 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ELMO3Q96BJ8 720 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SGF29Q96ES7 293 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 EIF2AQ9BY44 585 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 DHX33Q9H6R0 707 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 PNPLA8Q9NP80 782 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 RNF11Q9Y3C5 154 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TRIM17Q9Y577 477 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 BRCA1P38398 1863 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CCDC162PA2VCL2 907 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SOBPA7XYQ1 873 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TPD52L2O43399 206 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 PSMD10O75832 226 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 H6PDO95479 791 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CYP3A4P08684 503 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TM4SF1P30408 202 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 HMOX2P30519 316 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 HSPA1LP34931 641 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF76P36508 570 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TMED10P49755 219 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 YWHAGP61981 247 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 PSMC5P62195 406 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 TUBA4AP68366 448 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC10A5Q5PT55 438 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ITPRIPL1Q6GPH6 555 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 DCLRE1AQ6PJP8 1040 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CBWD2Q8IUF1 395 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 LILRA2Q8N149 483 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 KBTBD7Q8WVZ9 684 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CCDC127Q96BQ5 260 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 VPS45Q9NRW7 570 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CNOT11Q9UKZ1 510 aaKnown RBP8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CDH7Q9ULB5 785 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 DNAJC16Q9Y2G8 782 aa8.3□□□□□ -1.08
HMGXB4-202ENST00000418170 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GOLGA8IPA6NC78 632 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GOLGA8JA6NMD2 632 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF701M0R085 212 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 FUCA1P04066 466 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC5A3P53794 718 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TXNL4AP83876 142 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PEX6Q13608 980 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 SNRNP35Q16560 246 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 LGSNQ5TDP6 509 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PDPK2PQ6A1A2 396 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 MAVSQ7Z434 540 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TRIM50Q86XT4 487 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF512Q96ME7 567 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TCHPQ9BT92 498 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 COPS7BQ9H9Q2 264 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 IFT122Q9HBG6 1241 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 XPNPEP1Q9NQW7 623 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 DNAJC28Q9NX36 388 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 LOC100653049A0A140TA62 436 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 ARHGEF35A5YM69 484 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TBC1D12O60347 775 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 KRT34O76011 436 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 CRHR1P34998 444 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 IDH3AP50213 366 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PRELPP51888 382 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 SNRPFP62306 86 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 NOMO3P69849 1222 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 MRPS22P82650 360 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GPR180Q86V85 440 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PHF13Q86YI8 300 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GALNT4Q8N4A0 578 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TAB3Q8N5C8 712 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PPM1NQ8N819 430 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 ACTL9Q8TC94 416 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 GPATCH1Q9BRR8 931 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 FAM96AQ9H5X1 160 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TRPV5Q9NQA5 729 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PARVAQ9NVD7 372 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PRPF19Q9UMS4 504 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 H3BNH8 94 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 BAIAP3O94812 1187 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 C8BP07358 591 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 COX4I1P13073 169 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 STAT2P52630 851 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 OTUD4Q01804 1114 aaKnown RBP8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 KCNC4Q03721 635 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 ITGA7Q13683 1181 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TEDDM1Q5T9Z0 273 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC2A7Q6PXP3 512 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TPTE2Q6XPS3 522 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 TRIM72Q6ZMU5 477 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 CTAGE3PQ8IX95 158 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 ARL10Q8N8L6 244 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 DDHD1Q8NEL9 900 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 CASP10Q92851 521 aa8.29□□□□□ -1.08
HMGXB4-202ENST00000418170 PLEKHA8Q96JA3 519 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms