RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ZNF135P52742 658 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-205ENST00000417664 CACNA2D1P54289 1103 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ROR1Q01973 937 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 DEUP1Q05D60 604 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ZNF844Q08AG5 666 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 IFFO1Q0D2I5 559 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.39
SSBP3-205ENST00000417664 GPS1Q13098 491 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 CA9Q16790 459 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 SLC39A5Q6ZMH5 540 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 BZW1Q7L1Q6 419 aaKnown RBP17.46■□□□□ 0.39
SSBP3-205ENST00000417664 LRRTM3Q86VH5 581 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 HOOK3Q86VS8 718 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 PQLC3Q8N755 202 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 PCDH19Q8TAB3 1148 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 TMEM175Q9BSA9 504 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 TMEM109Q9BVC6 243 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ZCWPW1Q9H0M4 648 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 EPB41L4BQ9H329 900 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 NRDE2Q9H7Z3 1164 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 TMEM30AQ9NV96 361 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 GPATCH2LQ9NWQ4 482 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ADAM28Q9UKQ2 775 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 A6NNZ2 444 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 YJEFN3A6XGL0 299 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 E7ENQ6 273 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 RIPK2O43353 540 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 IFNB1P01574 187 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 USP17L7P0C7H9 530 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 CYP2F1P24903 491 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 XRCC4Q13426 336 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 TUBB8Q3ZCM7 444 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 PPP6R3Q5H9R7 873 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 GPRIN1Q7Z2K8 1008 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 NPAS4Q8IUM7 802 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 CRIPAKQ8N1N5 446 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 NDRG1Q92597 394 aaKnown RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 ARL8AQ96BM9 186 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 ATP6V1G3Q96LB4 118 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 OXCT2Q9BYC2 517 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 ADAM7Q9H2U9 754 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 SEMA4AQ9H3S1 761 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 AAASQ9NRG9 546 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 TMLHEQ9NVH6 421 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 TTC3P53804 2025 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 BCLAF3A2AJT9 711 aaKnown RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 ZNF189O75820 626 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 FYNP06241 537 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 SCAPQ12770 1279 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 TTMPQ5BVD1 217 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 EFHC2Q5JST6 749 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 AGBL2Q5U5Z8 902 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 OTUD1Q5VV17 481 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 SYPL2Q5VXT5 272 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 DARS2Q6PI48 645 aaKnown RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 VSTM1Q6UX27 236 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 CCDC25Q86WR0 208 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 FAM131BQ86XD5 332 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 CCDC185Q8N715 623 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 RTP4Q96DX8 246 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 CSPG4P5Q96PW8 444 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 DNAJB4Q9UDY4 337 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 NAALADL1Q9UQQ1 740 aa17.45■□□□□ 0.38
SSBP3-205ENST00000417664 PRG3Q9Y2Y8 225 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-205ENST00000417664 SF3B1O75533 1304 aaKnown RBP eCLIP17.44■□□□□ 0.384e-6■■■■■ 92.4
SSBP3-205ENST00000417664 PTPRDP23468 1912 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 OR6C75A6NL08 312 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 F8W810 466 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 H3BRJ5 948 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 NCAM1P13591 858 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 ACTN2P35609 894 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 ATXN1P54253 815 aaKnown RBP17.44■□□□□ 0.38
SSBP3-205ENST00000417664 SMARCB1Q12824 385 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 MRPL58Q14197 206 aaKnown RBP17.44■□□□□ 0.38
SSBP3-205ENST00000417664 SLC29A2Q14542 456 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 ARL13BQ3SXY8 428 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 RNASEH2BQ5TBB1 312 aaKnown RBP17.44■□□□□ 0.38
SSBP3-205ENST00000417664 HFE2Q6ZVN8 426 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 BHLHA9Q7RTU4 235 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 GLIS1Q8NBF1 620 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 KCTD15Q96SI1 283 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-205ENST00000417664 TMEM209Q96SK2 561 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 ROPN1BQ9BZX4 212 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-205ENST00000417664 ROPN1Q9HAT0 212 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-205ENST00000417664 WBP1LQ9NX94 342 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
SSBP3-205ENST00000417664 H7C0C1 242 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 TTC4O95801 387 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 ZSCAN5DPP0CG00 497 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 ATP5OP48047 213 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 FAAP100Q0VG06 881 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 CDKL3Q8IVW4 592 aaPredicted RBP17.43■□□□□ 0.38
SSBP3-205ENST00000417664 PPIL6Q8IXY8 311 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 SLC7A14Q8TBB6 771 aa17.43■□□□□ 0.38
SSBP3-205ENST00000417664 CDC42EP4Q9H3Q1 356 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms