RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
SCAF8-203ENST00000417268 CEP19Q96LK0 163 aa13.25□□□□□ -0.29
SCAF8-203ENST00000417268 HTATIP2Q9BUP3 242 aa13.25□□□□□ -0.29
SCAF8-203ENST00000417268 TLR10Q9BXR5 811 aa13.25□□□□□ -0.29
SCAF8-203ENST00000417268 DHX33Q9H6R0 707 aaKnown RBP13.25□□□□□ -0.29
SCAF8-203ENST00000417268 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
SCAF8-203ENST00000417268 PDE2AO00408 941 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ADRB2P07550 413 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 BMP6P22004 513 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 GRM5P41594 1212 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 CENPCQ03188 943 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 MTM1Q13496 603 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 KCNA10Q16322 511 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ZDHHC17Q8IUH5 632 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 KIAA2013Q8IYS2 634 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 KRT35Q92764 455 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 MBOAT7Q96N66 472 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 RPRD1AQ96P16 312 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 CCT7Q99832 543 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 PAK5Q9P286 719 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 NUP188Q5SRE5 1749 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 APRTP07741 180 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 MYBL2P10244 700 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 TTC30AQ86WT1 665 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 TSPAN18Q96SJ8 248 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 RRN3Q9NYV6 651 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 PCDHA2Q9Y5H9 948 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 EFTUD2Q15029 972 aaKnown RBP eCLIP13.24□□□□□ -0.294e-11■■■■■ 57.9
SCAF8-203ENST00000417268 PDK2Q15119 407 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 C4orf22Q6V702 233 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 FAM172AQ8WUF8 416 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 FOXP3Q9BZS1 431 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 KCTD10Q9H3F6 313 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 GIT1Q9Y2X7 761 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 KRT34O76011 436 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 PROSCO94903 275 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 MAP4P27816 1152 aaKnown RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ATXN3P54252 364 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 NOMO2Q5JPE7 1267 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ARHGAP22Q7Z5H3 698 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 SLC13A5Q86YT5 568 aaPredicted RBP13.24□□□□□ -0.29
SCAF8-203ENST00000417268 SEMA4AQ9H3S1 761 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 ETAA1Q9NY74 926 aa13.24□□□□□ -0.29
SCAF8-203ENST00000417268 B4GALT5O43286 388 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 PDE5AO76074 875 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 NFICP08651 508 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 MBL2P11226 248 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 KPNA1P52294 538 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 RXFP2Q8WXD0 754 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 NMD3Q96D46 503 aaKnown RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ZNF229Q9UJW7 825 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 E7ENQ6 273 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 SMAPO00193 183 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 RPL9P32969 192 aaKnown RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 DLG4P78352 724 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 SLFN11Q7Z7L1 901 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 PRCCQ92733 491 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 AGAP3Q96P47 875 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 CDK5RAP1Q96SZ6 601 aaKnown RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 FAM105AQ9NUU6 356 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ZACNQ401N2 412 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ARID3BQ8IVW6 561 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 CNTNAP2Q9UHC6 1331 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 F5H5T6 163 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ADCY6O43306 1168 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 KRT4P19013 534 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 PTK7Q13308 1070 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 ZNF177Q13360 481 aaPredicted RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 LRRC8EQ6NSJ5 796 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 DDX53Q86TM3 631 aaKnown RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 SLC2A14Q8TDB8 520 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
SCAF8-203ENST00000417268 GLI3P10071 1580 aa13.23□□□□□ -0.29
SCAF8-203ENST00000417268 A0A0B4J269 797 aa13.22□□□□□ -0.29
SCAF8-203ENST00000417268 MOXD2PA6NHM9 499 aa13.22□□□□□ -0.29
SCAF8-203ENST00000417268 ATP9BO43861 1147 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms