RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 UBA3Q8TBC4 463 aa18.78■□□□□ 0.6
CPNE1-210ENST00000416778 NDRG1Q92597 394 aaKnown RBP18.78■□□□□ 0.6
CPNE1-210ENST00000416778 P2RY11Q96G91 374 aa18.78■□□□□ 0.6
CPNE1-210ENST00000416778 CDK5RAP1Q96SZ6 601 aaKnown RBP18.78■□□□□ 0.6
CPNE1-210ENST00000416778 MARK1Q9P0L2 795 aa18.78■□□□□ 0.6
CPNE1-210ENST00000416778 LSM7Q9UK45 103 aaKnown RBP18.78■□□□□ 0.6
CPNE1-210ENST00000416778 TSPAN16Q9UKR8 245 aa18.78■□□□□ 0.6
CPNE1-210ENST00000416778 INVSQ9Y283 1065 aa18.78■□□□□ 0.6
CPNE1-210ENST00000416778 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
CPNE1-210ENST00000416778 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 XPO1O14980 1071 aaKnown RBP18.77■□□□□ 0.6
CPNE1-210ENST00000416778 P4HA2O15460 535 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 EPN2O95208 641 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 ZBED1O96006 694 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 CISD3P0C7P0 127 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 ZNF806P0C7X5 589 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 TBXAS1P24557 533 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-210ENST00000416778 STX17P56962 302 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 SLC8A3P57103 927 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 COG7P83436 770 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 GOLGA7BQ2TAP0 167 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 CCDC40Q4G0X9 1142 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 PREPLQ4J6C6 727 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-210ENST00000416778 PKDCCQ504Y2 493 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 USP39Q53GS9 565 aaKnown RBP18.77■□□□□ 0.6
CPNE1-210ENST00000416778 PRR23CQ6ZRP0 262 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 TPGS1Q6ZTW0 290 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 BHLHA9Q7RTU4 235 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 MIB1Q86YT6 1006 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 TFAP2BQ92481 460 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 CNOT6LQ96LI5 555 aaKnown RBP18.77■□□□□ 0.6
CPNE1-210ENST00000416778 SRRTQ9BXP5 876 aaKnown RBP18.77■□□□□ 0.6
CPNE1-210ENST00000416778 ZDHHC4Q9NPG8 344 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 FBXO10Q9UK96 956 aa18.77■□□□□ 0.6
CPNE1-210ENST00000416778 MYH10P35580 1976 aa18.77■□□□□ 0.59
CPNE1-210ENST00000416778 O00370 1275 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 CACNG3O60359 315 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 GABBR2O75899 941 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 TYRP14679 529 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 CD19P15391 556 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 YWHAGP61981 247 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPNE1-210ENST00000416778 EFEMP1Q12805 493 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 EOGTQ5NDL2 527 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 PLA2G2CQ5R387 149 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 ANO7Q6IWH7 933 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 LCLAT1Q6UWP7 414 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 NUDT18Q6ZVK8 323 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 TRIM59Q8IWR1 403 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 TERB1Q8NA31 727 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 OLIG1Q8TAK6 271 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 KAT5Q92993 513 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 ZSWIM1Q9BR11 485 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 BBS2Q9BXC9 721 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 ULBP1Q9BZM6 244 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 ZNF510Q9Y2H8 683 aa18.76■□□□□ 0.59
CPNE1-210ENST00000416778 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 NEDD8-MDP1E9PL57 170 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 GDF9O60383 454 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 FOXD2O60548 495 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 RHOBTB1O94844 696 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 GNA14O95837 355 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 PAEPP09466 180 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 BCAT1P54687 386 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 MARSP56192 900 aaKnown RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 BST2Q10589 180 aaKnown RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 KCNH2Q12809 1159 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 CCDC6Q16204 474 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 CNGA2Q16280 664 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 TMEM270Q6UE05 265 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 MDGA1Q8NFP4 955 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 SLC35F5Q8WV83 523 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 KCTD13Q8WZ19 329 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 NT5C1BQ96P26 610 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 XPO6Q96QU8 1125 aaKnown RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 RTKNQ9BST9 563 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 TPSD1Q9BZJ3 242 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 DNAJC17Q9NVM6 304 aaKnown RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 KIAA1468Q9P260 1216 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 HESX1Q9UBX0 185 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 CDV3Q9UKY7 258 aaKnown RBP18.75■□□□□ 0.59
CPNE1-210ENST00000416778 CTNND2Q9UQB3 1225 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 PCDHB4Q9Y5E5 795 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 PCDHGA5Q9Y5G8 931 aa18.75■□□□□ 0.59
CPNE1-210ENST00000416778 MED19A0JLT2 244 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-210ENST00000416778 DCDC2BA2VCK2 349 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 PRRT4C9JH25 899 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 ALDH1A2O94788 518 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 CETN1Q12798 172 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 SF3A2Q15428 464 aaKnown RBP18.74■□□□□ 0.59
CPNE1-210ENST00000416778 C10orf76Q5T2E6 689 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 RRAGAQ7L523 313 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 NETO1Q8TDF5 533 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 DCLK3Q9C098 648 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 LRRC4Q9HBW1 653 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 POLMQ9NP87 494 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-210ENST00000416778 MARCH2Q9P0N8 246 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 RASAL2Q9UJF2 1139 aa18.74■□□□□ 0.59
CPNE1-210ENST00000416778 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms