RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SDE2Q6IQ49 451 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 TADA2BQ86TJ2 420 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 MIB1Q86YT6 1006 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 CHPFQ8IZ52 775 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 GUF1Q8N442 669 aaKnown RBP15.21■□□□□ 0.02
PAF1-202ENST00000416728 NMUR1Q9HB89 426 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.21■□□□□ 0.02
PAF1-202ENST00000416728 MARK1Q9P0L2 795 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 CALCOCO1Q9P1Z2 691 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 DNMT3LQ9UJW3 386 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 NAGPAQ9UK23 515 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 NUDT5Q9UKK9 219 aa15.21■□□□□ 0.02
PAF1-202ENST00000416728 FAM237AA0A1B0GTK4 181 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 GIPC1O14908 333 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 MDM4O15151 490 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 AP5Z1O43299 807 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 CSRP1P21291 193 aaKnown RBP15.2■□□□□ 0.02
PAF1-202ENST00000416728 PLA2G4AP47712 749 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 PSEN1P49768 467 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 KIF11P52732 1056 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 RPL6Q02878 288 aaKnown RBP15.2■□□□□ 0.02
PAF1-202ENST00000416728 ZNF252P-AS1Q0IIN9 211 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 DPYDQ12882 1025 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 ADAM9Q13443 819 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 SLC36A4Q6YBV0 504 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 CCDC186Q7Z3E2 898 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 TMEM8AQ9HCN3 771 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 TMEM74BQ9NUR3 256 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 HCN2Q9UL51 889 aa15.2■□□□□ 0.02
PAF1-202ENST00000416728 ATXN2Q99700 1313 aaKnown RBP15.2■□□□□ 0.02
PAF1-202ENST00000416728 A0A1W2PQF6 199 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 CFIP05156 583 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 RALAP11233 206 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 CEACAM1P13688 526 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 ITPKAP23677 461 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 HOXD12P35452 270 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 MAPK8P45983 427 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 DGKGP49619 791 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 ZNF394Q53GI3 561 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 KRT39Q6A163 491 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 TOGARAM2Q6ZUX3 1019 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
PAF1-202ENST00000416728 BHMTQ93088 406 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 ACOX2Q99424 681 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 DUSP16Q9BY84 665 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 PILRBQ9UKJ0 227 aa15.19■□□□□ 0.02
PAF1-202ENST00000416728 CHD8Q9HCK8 2581 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 MAP1BP46821 2468 aaKnown RBP15.18■□□□□ 0.02
PAF1-202ENST00000416728 PRRT4C9JH25 899 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 ZNF217O75362 1048 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 STC2O76061 302 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 ENGP17813 658 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 GTF2H1P32780 548 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 PPP1R26Q5T8A7 1209 aaPredicted RBP15.18■□□□□ 0.02
PAF1-202ENST00000416728 PEAR1Q5VY43 1037 aaPredicted RBP15.18■□□□□ 0.02
PAF1-202ENST00000416728 SLC23A3Q6PIS1 610 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 Q6ZNB5 142 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 KRBA2Q6ZNG9 492 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 SCD5Q86SK9 330 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 TTC39CQ8N584 583 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 HEXIM2Q96MH2 286 aaKnown RBP15.18■□□□□ 0.02
PAF1-202ENST00000416728 CDK5RAP1Q96SZ6 601 aaKnown RBP15.18■□□□□ 0.02
PAF1-202ENST00000416728 GABRG3Q99928 467 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 PLK2Q9NYY3 685 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 CLIC5Q9NZA1 410 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 ZDHHC9Q9Y397 364 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 USP3Q9Y6I4 520 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 MYOFQ9NZM1 2061 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 THADAQ6YHU6 1953 aa15.18■□□□□ 0.02
PAF1-202ENST00000416728 IGHV1OR15-9A0A0B4J2B8 117 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 A0A1W2PQ27 194 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 A0A1W2PQ64 194 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 A0A1W2PQD8 194 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 NDUFV2P19404 249 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 MXI1P50539 228 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 ATXN3P54252 364 aaPredicted RBP15.17■□□□□ 0.02
PAF1-202ENST00000416728 COG7P83436 770 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 ZNF33AQ06730 810 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 FOXC1Q12948 553 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 EDRF1Q3B7T1 1238 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 ZCWPW2Q504Y3 356 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 KIAA1211LQ6NV74 962 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 RABEPKQ7Z6M1 372 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 DEFB119Q8N690 84 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 DEFB124Q8NES8 71 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 CEP76Q8TAP6 659 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 ERLEC1Q96DZ1 483 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 FAXDC2Q96IV6 333 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 SCAND2PQ9GZW5 306 aaPredicted RBP15.17■□□□□ 0.02
PAF1-202ENST00000416728 CACNA2D2Q9NY47 1150 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 RASAL2Q9UJF2 1139 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 SLC6A14Q9UN76 642 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 CYP8B1Q9UNU6 501 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 ZNF510Q9Y2H8 683 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 ATP6V1DQ9Y5K8 247 aa15.17■□□□□ 0.02
PAF1-202ENST00000416728 NUP205Q92621 2012 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 GFRA2O00451 464 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 CISD3P0C7P0 127 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 CHKAP35790 457 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms