RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 ABI2Q9NYB9 513 aaPredicted RBP13.9□□□□□ -0.18
ZNF3-206ENST00000415068 FZD10Q9ULW2 581 aa13.9□□□□□ -0.18
ZNF3-206ENST00000415068 NAALADL1Q9UQQ1 740 aa13.9□□□□□ -0.18
ZNF3-206ENST00000415068 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
ZNF3-206ENST00000415068 CDY1Q9Y6F8 540 aa13.9□□□□□ -0.18
ZNF3-206ENST00000415068 TCRBV7S2A1N4TA0A589 114 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 WDR27A2RRH5 827 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 M0QYT0 321 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 CAPN9O14815 690 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 ZNF189O75820 626 aaPredicted RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 FGF18O76093 207 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 KRT1P04264 644 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 CPB1P15086 417 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 YWHAQP27348 245 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 PBX3P40426 434 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 NR2C2P49116 596 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 YWHAGP61981 247 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 NRG1Q02297 640 aaPredicted RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 DUSP4Q13115 394 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 CUL1Q13616 776 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 PPP2R5DQ14738 602 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 BRMS1LQ5PSV4 323 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 DUPD1Q68J44 220 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 SLC9A4Q6AI14 798 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 LILRA6Q6PI73 481 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 PRSS55Q6UWB4 352 aaPredicted RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 SLC35B2Q8TB61 432 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 NDRG1Q92597 394 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 RNF25Q96BH1 459 aaPredicted RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 TRMT2BQ96GJ1 504 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 HAPLN3Q96S86 360 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 CDK5RAP1Q96SZ6 601 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 HERPUD2Q9BSE4 406 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 DDX47Q9H0S4 455 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 ZBP1Q9H171 429 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 PCDH18Q9HCL0 1135 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 MRPL17Q9NRX2 175 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 CXXC1Q9P0U4 656 aaPredicted RBP13.89□□□□□ -0.19
ZNF3-206ENST00000415068 PCSK1NQ9UHG2 260 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 PTPRSQ13332 1948 aa13.89□□□□□ -0.19
ZNF3-206ENST00000415068 LRRD1A4D1F6 860 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ADAM12O43184 909 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 RAD51CO43502 376 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ERLIN1O75477 346 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ITGAVP06756 1048 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 RHOXF2BP0C7M4 288 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 SLC2A3P11169 496 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 NCAM1P13591 858 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ATP2A2P16615 1042 aaKnown RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 TFE3P19532 575 aaPredicted RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 STIP1P31948 543 aaKnown RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 KPNA1P52294 538 aaPredicted RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 DEUP1Q05D60 604 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 SEMA3BQ13214 749 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 DDR2Q16832 855 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ARL13BQ3SXY8 428 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 CCDC137Q6PK04 289 aaKnown RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 CCDC50Q8IVM0 306 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 HDAC7Q8WUI4 952 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 B3GALT6Q96L58 329 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 SAMD11Q96NU1 681 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 PNKPQ96T60 521 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 LBHD1Q9BQE6 289 aaPredicted RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 RHOXF2Q9BQY4 288 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 SNRNP25Q9BV90 132 aaKnown RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 RAB17Q9H0T7 212 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 CRISPLD1Q9H336 500 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 SMOC2Q9H3U7 446 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 RETREG1Q9H6L5 497 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ZWILCHQ9H900 591 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ARHGEF38Q9NXL2 777 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 CALCOCO1Q9P1Z2 691 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 AMACRQ9UHK6 382 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 ASB3Q9Y575 518 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 RAD54BQ9Y620 910 aa13.88□□□□□ -0.19
ZNF3-206ENST00000415068 V9GYY5 206 aaPredicted RBP13.88□□□□□ -0.19
ZNF3-206ENST00000415068 APOC4-APOC2K7ER74 178 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 APOC2P02655 101 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 URODP06132 367 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 CSH1P0DML2 217 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 CSH2P0DML3 217 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 TGM2P21980 687 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 SULT1E1P49888 294 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 CDH6P55285 790 aa13.87□□□□□ -0.19
ZNF3-206ENST00000415068 DR1Q01658 176 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms