RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SEPT11Q9NVA2 429 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 GALNT8Q9NY28 637 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 GPRC5DQ9NZD1 345 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TMCC3Q9ULS5 477 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ATP11BQ9Y2G3 1177 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PCDHGB5Q9Y5G0 923 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 RPTORQ8N122 1335 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 hCG_1807616A0A1W2PRN6 198 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PEX12O00623 359 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ALDH1A2O94788 518 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 MPIG6BO95866 241 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TGFB1P01137 390 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ALOX15P16050 662 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 CSF2RBP32927 897 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ARL4AP40617 200 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 KCNC1P48547 511 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 NRG3P56975 720 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 RPP30P78346 268 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ACVR2BQ13705 512 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TMEM266Q2M3C6 531 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 BMP2KLQ5H9B9 411 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ZNF385CQ66K41 422 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ANKRD40Q6AI12 368 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 DSTYKQ6XUX3 929 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ETV3LQ6ZN32 361 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TMEM151BQ8IW70 566 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ANKRD53Q8N9V6 530 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 FANCBQ8NB91 859 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 OTUD7AQ8TE49 926 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ZKSCAN4Q969J2 545 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 FAM122AQ96E09 287 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TOE1Q96GM8 510 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ZNF333Q96JL9 665 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 MRGPRX4Q96LA9 322 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 HTATIP2Q9BUP3 242 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ST6GALNAC4Q9H4F1 302 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 SLC32A1Q9H598 525 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 DCAF16Q9NXF7 216 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 VPS28Q9UK41 221 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 CORO1CQ9ULV4 474 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 MAFFQ9ULX9 164 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ASB1Q9Y576 335 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ZSWIM8A7E2V4 1837 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TMEM265A0A087WTH1 108 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 SMTNL1A8MU46 457 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 RNF225M0QZC1 329 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 HTATSF1O43719 755 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 SRGAP2O75044 1071 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 FSBPO95073 299 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 LRG1P02750 347 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 HMGCRP04035 888 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 CYP21A2P08686 494 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TPH1P17752 444 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 RGS2P41220 211 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 NKX3-2P78367 333 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 CYP4A11Q02928 519 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TLE1Q04724 770 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 EIF2B5Q13144 721 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 LASP1Q14847 261 aaKnown RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 GPR68Q15743 365 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ATG16L1Q676U5 607 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 IQCA1Q86XH1 822 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TRIM48Q8IWZ4 208 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ARL6IP6Q8N6S5 226 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TSPYL6Q8N831 410 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PHF7Q9BWX1 381 aaPredicted RBP2.81□□□□□ -1.96
MCF2-204ENST00000414978 ZNF341Q9BYN7 854 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 TBK1Q9UHD2 729 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 ACSL6Q9UKU0 697 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PADI4Q9UM07 663 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 PCDHB7Q9Y5E2 793 aa2.81□□□□□ -1.96
MCF2-204ENST00000414978 LRRC37A2A6NM11 1700 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 KDM3AQ9Y4C1 1321 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 A0A1W2PQM1 296 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 SYN3O14994 580 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 KCNQ3O43525 872 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 STC2O76061 302 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 TOX4O94842 621 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 ABHD16AO95870 558 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 CHGBP05060 677 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 DBHP09172 617 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 CD8BP10966 210 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 GZMAP12544 262 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 SLC6A4P31645 630 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 CYP27A1Q02318 531 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 SCAPQ12770 1279 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 RAB32Q13637 225 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 RTP5Q14D33 572 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 CRY2Q49AN0 593 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 PRR5LQ6MZQ0 368 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 ATF7IPQ6VMQ6 1270 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 H1FNTQ75WM6 255 aaPredicted RBP2.8□□□□□ -1.96
MCF2-204ENST00000414978 SPRED2Q7Z698 418 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 MICU3Q86XE3 530 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 CLEC10AQ8IUN9 316 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 ATRIPQ8WXE1 791 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 SEC14L1Q92503 715 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 GCDHQ92947 438 aaPredicted RBP2.8□□□□□ -1.96
MCF2-204ENST00000414978 ERO1AQ96HE7 468 aa2.8□□□□□ -1.96
MCF2-204ENST00000414978 HIC2Q96JB3 615 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms