RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 LSM7Q9UK45 103 aaKnown RBP17.62■□□□□ 0.41
SF1-207ENST00000413951 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF1-207ENST00000413951 PTPRDP23468 1912 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 HELZP42694 1942 aaKnown RBP17.61■□□□□ 0.41
SF1-207ENST00000413951 KCNJ18B7U540 433 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 P4HA2O15460 535 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 TLR5O60602 858 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 HLA-DRAP01903 254 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 FAM200BP0CF97 657 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 ATP5C1P36542 298 aaKnown RBP17.61■□□□□ 0.41
SF1-207ENST00000413951 FMO5P49326 533 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 NDST1P52848 882 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 LMAN2Q12907 356 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 KCNJ12Q14500 433 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 ANO4Q32M45 955 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 TCP11X2Q5H9J9 407 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 TCERG1LQ5VWI1 586 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 SDE2Q6IQ49 451 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 PAQR9Q6ZVX9 377 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 FBXL13Q8NEE6 735 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 OLIG1Q8TAK6 271 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 SLC2A14Q8TDB8 520 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 CYP3A43Q9HB55 503 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 GMIPQ9P107 970 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 SPAG17Q6Q759 2223 aa17.61■□□□□ 0.41
SF1-207ENST00000413951 KCNK5O95279 499 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 AFPP02771 609 aaKnown RBP17.6■□□□□ 0.41
SF1-207ENST00000413951 HOXD12P35452 270 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 PIK3CAP42336 1068 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 KIR2DL1P43626 348 aaPredicted RBP17.6■□□□□ 0.41
SF1-207ENST00000413951 DHPSP49366 369 aaPredicted RBP17.6■□□□□ 0.41
SF1-207ENST00000413951 PSEN1P49768 467 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 SHC2P98077 582 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 KCNH2Q12809 1159 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 MAN2A1Q16706 1144 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 HTR3DQ70Z44 454 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 PGBD3Q8N328 593 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 FAXDC2Q96IV6 333 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 ZFRQ96KR1 1074 aaKnown RBP17.6■□□□□ 0.41
SF1-207ENST00000413951 CDK5RAP1Q96SZ6 601 aaKnown RBP17.6■□□□□ 0.41
SF1-207ENST00000413951 NT5C1AQ9BXI3 368 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 CCSER2Q9H7U1 834 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 TMEM9BQ9NQ34 198 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 RXFP3Q9NSD7 469 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 EVLQ9UI08 416 aaPredicted RBP17.6■□□□□ 0.41
SF1-207ENST00000413951 SCML2Q9UQR0 700 aa17.6■□□□□ 0.41
SF1-207ENST00000413951 LRRC10BA6NIK2 292 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 SGK1O00141 431 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 TULP3O75386 442 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 PMLP29590 882 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 P2RY2P41231 377 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 MAP3K7CLP57077 242 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 KDSRQ06136 332 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 E2F5Q15329 346 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 ST3GAL2Q16842 350 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 HSP90AA4PQ58FG1 418 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 N4BP2L1Q5TBK1 243 aaPredicted RBP17.59■□□□□ 0.41
SF1-207ENST00000413951 TMEM92Q6UXU6 159 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 SLC36A4Q6YBV0 504 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 APTXQ7Z2E3 356 aaKnown RBP17.59■□□□□ 0.41
SF1-207ENST00000413951 RABEPKQ7Z6M1 372 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 BBS7Q8IWZ6 715 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 ETFBKMTQ8IXQ9 262 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 ZNF513Q8N8E2 541 aaPredicted RBP17.59■□□□□ 0.41
SF1-207ENST00000413951 TERB1Q8NA31 727 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 SEMA4DQ92854 862 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 HNRNPABQ99729 332 aaKnown RBP17.59■□□□□ 0.41
SF1-207ENST00000413951 SMOQ99835 787 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 TUBGCP2Q9BSJ2 902 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 NUSAP1Q9BXS6 441 aaKnown RBP17.59■□□□□ 0.41
SF1-207ENST00000413951 SMOC1Q9H4F8 434 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 CYLDQ9NQC7 956 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 LIMA1Q9UHB6 759 aaKnown RBP17.59■□□□□ 0.41
SF1-207ENST00000413951 INVSQ9Y283 1065 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
SF1-207ENST00000413951 LNP1A1A4G5 178 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 GTPBP10A4D1E9 387 aaKnown RBP17.58■□□□□ 0.4
SF1-207ENST00000413951 C4orf47A7E2U8 309 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 AP5Z1O43299 807 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 CCDC130P13994 396 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.4
SF1-207ENST00000413951 MTIF2P46199 727 aaKnown RBP17.58■□□□□ 0.4
SF1-207ENST00000413951 INCA1Q0VD86 236 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 KRT31Q15323 416 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 C10orf76Q5T2E6 689 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 GRAMD4Q6IC98 578 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 TCEAL6Q6IPX3 200 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 C12orf40Q86WS4 652 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 LMO3Q8TAP4 145 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 PIGKQ92643 395 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 TCEAL3Q969E4 200 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 CYFIP2Q96F07 1278 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 SDCBP2Q9H190 292 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms