RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 FAM71AQ8IYT1 594 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 LOXL4Q96JB6 756 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 ARID3AQ99856 593 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 SLC4A5Q9BY07 1137 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 STK33Q9BYT3 514 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 FOXQ1Q9C009 403 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 LINC00597Q9H2U6 94 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 RETREG1Q9H6L5 497 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 MARCH2Q9P0N8 246 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 GMIPQ9P107 970 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 CFAP97Q9P2B7 532 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 HMGXB4Q9UGU5 601 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 SLC12A6Q9UHW9 1150 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 FBXO10Q9UK96 956 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 RAB23Q9ULC3 237 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 NDRG2Q9UN36 371 aaKnown RBP6.7□□□□□ -1.34
USP54-202ENST00000413442 SLC8A2Q9UPR5 921 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 SLC27A6Q9Y2P4 619 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 MTF2Q9Y483 593 aaPredicted RBP6.7□□□□□ -1.34
USP54-202ENST00000413442 NFE2L3Q9Y4A8 694 aa6.7□□□□□ -1.34
USP54-202ENST00000413442 MYO16Q9Y6X6 1858 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 A0A1W2PQH9 124 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 RNF225M0QZC1 329 aaPredicted RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 CACNG3O60359 315 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 LRRN2O75325 713 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 STC2O76061 302 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 F9P00740 461 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 LTFP02788 710 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 ADH5P11766 374 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 KRT5P13647 590 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 HNRNPLP14866 589 aaKnown RBP eCLIP6.69□□□□□ -1.343e-8■■■■□ 26.7
USP54-202ENST00000413442 SLC9A1P19634 815 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 CD72P21854 359 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 GNA15P30679 374 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 GBP1P32455 592 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 SLC11A2P49281 568 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 MRE11P49959 708 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 DGKEP52429 567 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 OXCT1P55809 520 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 DAOAP59103 153 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 YWHAZP63104 245 aaKnown RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 TPM4P67936 248 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 ZXDBP98169 803 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 CSTF1Q05048 431 aaKnown RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 TNK2Q07912 1038 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 LRMPQ12912 555 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 MTAPQ13126 283 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 EIF4HQ15056 248 aaKnown RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 PON2Q15165 354 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 CCDC142Q17RM4 750 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 GOLGA7BQ2TAP0 167 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 KLHL40Q2TBA0 621 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 FILIP1LQ4L180 1135 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 MIIPQ5JXC2 388 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 ADGRF1Q5T601 910 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 KLHDC7AQ5VTJ3 777 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 CDKAL1Q5VV42 579 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 FSTL4Q6MZW2 842 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 PMF1Q6P1K2 205 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 Q6ZNB5 142 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 RRAGAQ7L523 313 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 SCD5Q86SK9 330 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 WDR5BQ86VZ2 330 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 CCDC117Q8IWD4 279 aaPredicted RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 FAM217AQ8IXS0 508 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 MAML2Q8IZL2 1156 aaPredicted RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 TMEM35BQ8NCS4 154 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 GPT2Q8TD30 523 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 UCMAQ8WVF2 138 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 RUBCNQ92622 972 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 IQCDQ96DY2 449 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 ZFYVE19Q96K21 471 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 ZFRQ96KR1 1074 aaKnown RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 KREMEN1Q96MU8 473 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 SERPINB11Q96P15 392 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 EDEM3Q9BZQ6 932 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 SMG9Q9H0W8 520 aaKnown RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 EPC1Q9H2F5 836 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 CCSER2Q9H7U1 834 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 NMUR1Q9HB89 426 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 POPDC2Q9HBU9 364 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 POLMQ9NP87 494 aaPredicted RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP54-202ENST00000413442 LIMA1Q9UHB6 759 aaKnown RBP6.69□□□□□ -1.34
USP54-202ENST00000413442 DNAJC12Q9UKB3 198 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 MYO6Q9UM54 1294 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 TLR6Q9Y2C9 796 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 WNT6Q9Y6F9 365 aa6.69□□□□□ -1.34
USP54-202ENST00000413442 F5P12259 2224 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 CACNA1IQ9P0X4 2223 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 TYW5A2RUC4 315 aaKnown RBP6.68□□□□□ -1.34
USP54-202ENST00000413442 TBC1D3BA6NDS4 549 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 M0QYV0 167 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 FOXN3O00409 490 aaPredicted RBP6.68□□□□□ -1.34
USP54-202ENST00000413442 CAPN9O14815 690 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 CYP26A1O43174 497 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 THAP12O43422 761 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 GREM1O60565 184 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 KAT7O95251 611 aa6.68□□□□□ -1.34
USP54-202ENST00000413442 LSM8O95777 96 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms