RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 DMC1Q14565 340 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 C2orf27AQ580R0 203 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 MIIPQ5JXC2 388 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 TPGS1Q6ZTW0 290 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 THAP9Q9H5L6 903 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 LRRC4Q9HBW1 653 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 ARHGEF4Q9NR80 690 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 OTOGLQ3ZCN5 2332 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 RIF1Q5UIP0 2472 aaKnown RBP19.99■□□□□ 0.79
SF3A1-202ENST00000411423 EML5Q05BV3 1969 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 FAM186AA6NE01 2351 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 DCHS1Q96JQ0 3298 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 A0A0A0MRY4 1105 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 ATG13O75143 517 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 KRT5P13647 590 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 PON1P27169 355 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 KIR2DL1P43626 348 aaPredicted RBP19.98■□□□□ 0.79
SF3A1-202ENST00000411423 MTIF2P46199 727 aaKnown RBP19.98■□□□□ 0.79
SF3A1-202ENST00000411423 SLC8A3P57103 927 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 DAOAP59103 153 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 ANO4Q32M45 955 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 DENND1BQ6P3S1 775 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 RBM43Q6ZSC3 357 aaKnown RBP19.98■□□□□ 0.79
SF3A1-202ENST00000411423 SYT13Q7L8C5 426 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 CCDC33Q8N5R6 958 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 EDEM1Q92611 657 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 SAMSN1Q9NSI8 373 aaKnown RBP19.98■□□□□ 0.79
SF3A1-202ENST00000411423 MARCH2Q9P0N8 246 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 SFMBT1Q9UHJ3 866 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 CYTH4Q9UIA0 394 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 SLC8A2Q9UPR5 921 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 ZNF292O60281 2723 aa19.98■□□□□ 0.79
SF3A1-202ENST00000411423 SLC12A8A0AV02 714 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 NEDD8-MDP1E9PL57 170 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 ERCC5P28715 1186 aaPredicted RBP19.97■□□□□ 0.79
SF3A1-202ENST00000411423 CORO1AP31146 461 aaKnown RBP19.97■□□□□ 0.79
SF3A1-202ENST00000411423 TIE1P35590 1138 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 GPD2P43304 727 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 ARHGAP44Q17R89 818 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 BSPRYQ5W0U4 402 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 TMEM92Q6UXU6 159 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 GBP6Q6ZN66 633 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 SCML4Q8N228 414 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 ARHGAP18Q8N392 663 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 RUBCNQ92622 972 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 BHMTQ93088 406 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 EXOC4Q96A65 974 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 CNGB3Q9NQW8 809 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 MARK1Q9P0L2 795 aa19.97■□□□□ 0.79
SF3A1-202ENST00000411423 LSM7Q9UK45 103 aaKnown RBP19.97■□□□□ 0.79
SF3A1-202ENST00000411423 AGO1Q9UL18 857 aaKnown RBP19.97■□□□□ 0.79
SF3A1-202ENST00000411423 GVINP1Q7Z2Y8 2422 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 APODP05090 189 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 TYRP14679 529 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 TGM1P22735 817 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 GRIA2P42262 883 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 GOLGA8FQ08AF8 430 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 GOLGA8DPQ0D2H9 430 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 MAN2A1Q16706 1144 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 EXOC3L4Q17RC7 722 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 BTBD8Q5XKL5 378 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 PRR23BQ6ZRT6 265 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 TOGARAM2Q6ZUX3 1019 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 TADA2BQ86TJ2 420 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 KIAA2013Q8IYS2 634 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 SIX6OS1Q8N1H7 587 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 ALLCQ8N6M5 410 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 IL17RCQ8NAC3 791 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 IPO9Q96P70 1041 aaKnown RBP19.96■□□□□ 0.79
SF3A1-202ENST00000411423 BBS2Q9BXC9 721 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 PLK2Q9NYY3 685 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 APEX2Q9UBZ4 518 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 MMP17Q9ULZ9 603 aa19.96■□□□□ 0.79
SF3A1-202ENST00000411423 GTPBP10A4D1E9 387 aaKnown RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 SGK1O00141 431 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 MSI1O43347 362 aaKnown RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 CACNG3O60359 315 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 ADAM23O75077 832 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 FYNP06241 537 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 CISD3P0C7P0 127 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 PNMA6AP0CW24 399 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 RPL34P49207 117 aaKnown RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 KCNMA1Q12791 1236 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 SIM2Q14190 667 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 STILQ15468 1287 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 TPD52L1Q16890 204 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 RSRC2Q7L4I2 434 aaKnown RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 DENND1CQ8IV53 801 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 FMNL3Q8IVF7 1028 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 ZNF606Q8WXB4 792 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 CDK5RAP1Q96SZ6 601 aaKnown RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 HINFPQ9BQA5 517 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 MIS12Q9H081 205 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 NDST4Q9H3R1 872 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 PARD6AQ9NPB6 346 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 DNAJC17Q9NVM6 304 aaKnown RBP19.95■□□□□ 0.78
SF3A1-202ENST00000411423 TJP2Q9UDY2 1190 aa19.95■□□□□ 0.78
SF3A1-202ENST00000411423 PTPRZ1P23471 2315 aaPredicted RBP19.94■□□□□ 0.78
SF3A1-202ENST00000411423 EP300Q09472 2414 aaPredicted RBP19.94■□□□□ 0.78
SF3A1-202ENST00000411423 LETM1O95202 739 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms