RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 SRRM3A6NNA2 597 aaPredicted RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 ACOT8O14734 319 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 TLX3O43711 291 aaPredicted RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 TMPRSS11DO60235 418 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 ZC3H11AO75152 810 aaKnown RBP eCLIP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 SOCS5O75159 536 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 MBPP02686 304 aaPredicted RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 XRCC6P12956 609 aaKnown RBP eCLIP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 TCEA1P23193 301 aaKnown RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 GALNSP34059 522 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 IDUAP35475 653 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 POLD2P49005 469 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 ALDH7A1P49419 539 aaKnown RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 ENTPD1P49961 510 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 WNT3P56703 355 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 RAB1AP62820 205 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 SLC13A2Q13183 592 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 STK3Q13188 491 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 FAM110CQ1W6H9 321 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 IZUMO4Q1ZYL8 232 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 SMTNL2Q2TAL5 461 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 KRTAP24-1Q3LI83 254 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 C4orf46Q504U0 113 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 LMBRD2Q68DH5 695 aaPredicted RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 NADSYN1Q6IA69 706 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 NOP9Q86U38 636 aaKnown RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 IQCF1Q8N6M8 205 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 OR56A3Q8NH54 315 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 MAML1Q92585 1016 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 HIC2Q96JB3 615 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 RMI1Q9H9A7 625 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 SAP30LQ9HAJ7 183 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 AS3MTQ9HBK9 375 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 DNMT3BQ9UBC3 853 aaKnown RBP1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 RIMKLBQ9ULI2 386 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 ICAM5Q9UMF0 924 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 STXBP5LQ9Y2K9 1186 aa1.84□□□□□ -2.11
RNU4-43P-201ENST00000410628 EVPLQ92817 2033 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 FOXN3O00409 490 aaPredicted RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CD3EAPO15446 510 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CD63P08962 238 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PARP1P09874 1014 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CDK11BP21127 795 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 RPS6KB1P23443 525 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 EPHA3P29320 983 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 MLH1P40692 756 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PTDSS1P48651 473 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 VPS41P49754 854 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CLCN5P51795 746 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PGDP52209 483 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PGGT1BP53609 377 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 DSCR9P59020 149 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 KRT85P78386 507 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 RAE1P78406 368 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 GAB1Q13480 694 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 DENND2CQ68D51 928 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 GRHL2Q6ISB3 625 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PRSS57Q6UWY2 283 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CLEC9AQ6UXN8 241 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 ZNF783Q6ZMS7 281 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 USP49Q70CQ1 688 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CTU1Q7Z7A3 348 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 UBE2Q1Q7Z7E8 422 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 FAM71DQ8N9W8 422 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 SLC44A5Q8NCS7 719 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PPP1R35Q8TAP8 253 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 INPP5DQ92835 1189 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CDK5RAP3Q96JB5 506 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 TUBB6Q9BUF5 446 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 TRIM54Q9BYV2 358 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 ZMAT3Q9HA38 289 aaKnown RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 SMURF2Q9HAU4 748 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 CNNM1Q9NRU3 951 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 VPS45Q9NRW7 570 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 THSD1Q9NS62 852 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PLEKHB1Q9UF11 243 aaPredicted RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 FZD4Q9ULV1 537 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 MAFFQ9ULX9 164 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PCDHB2Q9Y5E7 798 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 PCDHGB1Q9Y5G3 927 aa1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 HEMK1Q9Y5R4 338 aaPredicted RBP1.83□□□□□ -2.12
RNU4-43P-201ENST00000410628 A0A1B0GVT2 93 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 F8W810 466 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 PODXLO00592 558 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 RRP9O43818 475 aaKnown RBP1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 PIAS2O75928 621 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 CGAP01215 116 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 CD19P15391 556 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 RECQLP46063 649 aaPredicted RBP1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 GATMP50440 423 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 JAK3P52333 1124 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 ARFIP2P53365 341 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 GAS1P54826 345 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 WDR5P61964 334 aaKnown RBP1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 TIAL1Q01085 375 aaKnown RBP eCLIP1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 GAD2Q05329 585 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 FGL2Q14314 439 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 KCNAB1Q14722 419 aa1.82□□□□□ -2.12
RNU4-43P-201ENST00000410628 SLC4A8Q2Y0W8 1093 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms