RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CXXC1Q9P0U4 656 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DOLKQ9UPQ8 538 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 COQ6Q9Y2Z9 468 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 AP4S1Q9Y587 144 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PNMA6FA0A0J9YX94 578 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 A0A0U1RQK1 487 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ZNF320A2RRD8 509 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TTLL8A6PVC2 850 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 LZTS3O60299 673 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TTC4O95801 387 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 AGTP01019 485 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CSTAP01040 98 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 COL6A1P12109 1028 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ITGB6P18564 788 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 UGT1A1P22309 533 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SOX6P35712 828 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 VHLP40337 213 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 STAT6P42226 847 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DYNLL1P63167 89 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ECT2LQ008S8 904 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SP140Q13342 867 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PIN1Q13526 163 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CRY1Q16526 586 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TRIM61Q5EBN2 209 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SLC27A3Q5K4L6 730 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 UBAP2Q5T6F2 1119 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ATG9BQ674R7 924 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RASSF6Q6ZTQ3 369 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RTL10Q7L3V2 364 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DGKHQ86XP1 1220 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SLC13A5Q86YT5 568 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SLC22A9Q8IVM8 553 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PAPD5Q8NDF8 572 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PPP1R2P1Q96PQ5 205 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SERPINI1Q99574 410 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TRIM2Q9C040 744 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ABCB6Q9NP58 842 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PCDHB16Q9NRJ7 776 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CNNM1Q9NRU3 951 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DDX43Q9NXZ2 648 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DACT1Q9NYF0 836 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 MRPL15Q9P015 296 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TRPC4Q9UBN4 977 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ALG5Q9Y673 324 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SAR1BQ9Y6B6 198 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SMIM31A0A1B0GVY4 71 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 NCK2O43639 380 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ECE2O60344 883 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TLR2O60603 784 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PLA2G6O60733 806 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RPS6KA5O75582 802 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ALDH1A2O94788 518 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 MT-ATP6P00846 226 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 GNAI2P04899 355 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ETFBP38117 255 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 UBE2HP62256 183 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PPARAQ07869 468 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 FRG1Q14331 258 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CCDC85BQ15834 202 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 FASTKD1Q53R41 847 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TRIQKQ629K1 86 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PDXDC2PQ6P474 469 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 KDM7AQ6ZMT4 941 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 FKBP9P1Q75LS8 142 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SULF1Q8IWU6 871 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 MAGEB6Q8N7X4 407 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RCBTB1Q8NDN9 531 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 FAM172AQ8WUF8 416 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 REPS1Q96D71 796 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RBM18Q96H35 190 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CCDC3Q9BQI4 270 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PKIBQ9C010 78 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 GRIP2Q9C0E4 1043 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 NIF3L1Q9GZT8 377 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 LSG1Q9H089 658 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CLK4Q9HAZ1 481 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ETNK2Q9NVF9 386 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 INTS13Q9NVM9 706 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 NSMCE4AQ9NXX6 385 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PPP4R1LQ9P1A2 415 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SNX9Q9Y5X1 595 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TRAV34A0A0B4J273 112 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CCDC78A2IDD5 438 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 KRBA1A5PL33 1030 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RGSL1A5PLK6 1076 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ATP6V1G2-DDX39BF2Z307 99 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DCLK1O15075 740 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PLSCR1O15162 318 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 STX10O60499 249 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 EXOC3O60645 756 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 USP1O94782 785 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ASLP04424 464 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CYP1A1P04798 512 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 FCER2P06734 321 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 FAM153BP0C7A2 387 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms