RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FAM183BPQ6ZVS7 135 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 HTR3DQ70Z44 454 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 RSRC2Q7L4I2 434 aaKnown RBP23.4■■□□□ 1.34
PTCD3-203ENST00000409783 BEND5Q7L4P6 421 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 CSGALNACT1Q8TDX6 532 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 MYOFQ9NZM1 2061 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 ZDBF2Q9HCK1 2354 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 CBFA2T2O43439 604 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 STC2O76061 302 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 UNGP13051 313 aaPredicted RBP23.39■■□□□ 1.33
PTCD3-203ENST00000409783 GLULP15104 373 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 SOX9P48436 509 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 ITPRIPL2Q3MIP1 535 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 SARM1Q6SZW1 724 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 Q6ZNB5 142 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 TPRG1Q6ZUI0 275 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 ADGRG2Q8IZP9 1017 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 TTC8Q8TAM2 541 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 CPA5Q8WXQ8 436 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 AGPAT1Q99943 283 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 TBC1D17Q9HA65 648 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 SFMBT1Q9UHJ3 866 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 CAPN11Q9UMQ6 739 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 NAALADL1Q9UQQ1 740 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 SH3BP1Q9Y3L3 701 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 PIAS3Q9Y6X2 628 aa23.39■■□□□ 1.33
PTCD3-203ENST00000409783 FAM170AA1A519 330 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 KLKB1P03952 638 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 GYPCP04921 128 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 TPM3P06753 285 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 CCDC172P0C7W6 258 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 PRKCIP41743 596 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 COG7P83436 770 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 SFMBT2Q5VUG0 894 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 SYPL2Q5VXT5 272 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 OR6B2Q6IFH4 312 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 TRIM72Q6ZMU5 477 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 ERICH1Q86X53 443 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 FMNL3Q8IVF7 1028 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 BBS7Q8IWZ6 715 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 ZNF687Q8N1G0 1237 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 FBXL6Q8N531 539 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 IPO4Q8TEX9 1081 aaKnown RBP23.38■■□□□ 1.33
PTCD3-203ENST00000409783 RNF139Q8WU17 664 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 FAM149B1Q96BN6 582 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 IQCDQ96DY2 449 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 SHDQ96IW2 340 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 C8orf33Q9H7E9 229 aaPredicted RBP23.38■■□□□ 1.33
PTCD3-203ENST00000409783 ECT2Q9H8V3 914 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 ASNSD1Q9NWL6 643 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 KMT2EQ8IZD2 1858 aa23.38■■□□□ 1.33
PTCD3-203ENST00000409783 SLC12A8A0AV02 714 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 SLC9A3R1O14745 358 aaPredicted RBP23.37■■□□□ 1.33
PTCD3-203ENST00000409783 GLI1P08151 1106 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 CD72P21854 359 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 CTHP32929 405 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 SNX16P57768 344 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 YWHAZP63104 245 aaKnown RBP23.37■■□□□ 1.33
PTCD3-203ENST00000409783 SLC6A3Q01959 620 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 ASIC2Q16515 512 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 CLEC16AQ2KHT3 1053 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 GAB4Q2WGN9 574 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 C2CD6Q53TS8 623 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 SLC26A9Q7LBE3 791 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 XYLT1Q86Y38 959 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 ZNF397Q8NF99 534 aaPredicted RBP23.37■■□□□ 1.33
PTCD3-203ENST00000409783 GOLGA1Q92805 767 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 ATP2A3Q93084 1043 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 OTUB2Q96DC9 234 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 C18orf8Q96DM3 657 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 SLC2A13Q96QE2 648 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 POPDC2Q9HBU9 364 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 TBC1D14Q9P2M4 693 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 STRIP2Q9ULQ0 834 aa23.37■■□□□ 1.33
PTCD3-203ENST00000409783 ZNF318Q5VUA4 2279 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 MIA3Q5JRA6 1907 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 KANSL1LA0AUZ9 987 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 SPECC1L-ADORA2AF8WAN1 911 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 CYP17A1P05093 508 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 NCAM1P13591 858 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 MMP8P22894 467 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 KPNA1P52294 538 aaPredicted RBP23.36■■□□□ 1.33
PTCD3-203ENST00000409783 ZBED6P86452 979 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 CENPCQ03188 943 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 GOLGA8FQ08AF8 430 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 GOLGA8DPQ0D2H9 430 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 PTP4A2Q12974 167 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 TRIP4Q15650 581 aaPredicted RBP23.36■■□□□ 1.33
PTCD3-203ENST00000409783 EFHC1Q5JVL4 640 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 TXNDC11Q6PKC3 985 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 RALGPS2Q86X27 583 aaPredicted RBP23.36■■□□□ 1.33
PTCD3-203ENST00000409783 ZDHHC17Q8IUH5 632 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 VSTM4Q8IW00 320 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 SLC30A5Q8TAD4 765 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 DQX1Q8TE96 717 aaKnown RBP23.36■■□□□ 1.33
PTCD3-203ENST00000409783 FOXQ1Q9C009 403 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 MFSD1Q9H3U5 465 aa23.36■■□□□ 1.33
PTCD3-203ENST00000409783 HBS1LQ9Y450 684 aaKnown RBP23.36■■□□□ 1.33
PTCD3-203ENST00000409783 MSI1O43347 362 aaKnown RBP23.35■■□□□ 1.33
PTCD3-203ENST00000409783 PI15O43692 258 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms