RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 UBXN6Q9BZV1 441 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 DNAJC17Q9NVM6 304 aaKnown RBP15.51■□□□□ 0.07
CBX3-203ENST00000409747 ZNF510Q9Y2H8 683 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 STARD13Q9Y3M8 1113 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 TYRP14679 529 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 STIM1Q13586 685 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 ARHGAP17Q68EM7 881 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 ZC3H3Q8IXZ2 948 aaKnown RBP15.51■□□□□ 0.07
CBX3-203ENST00000409747 HMGB4Q8WW32 186 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 INVSQ9Y283 1065 aa15.51■□□□□ 0.07
CBX3-203ENST00000409747 TCRBV21S2A2A0A5A6 115 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 ANTXRLA6NF34 631 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 ZBTB24O43167 697 aaPredicted RBP15.5■□□□□ 0.07
CBX3-203ENST00000409747 ADAM23O75077 832 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 HNRNPLP14866 589 aaKnown RBP eCLIP15.5■□□□□ 0.07
CBX3-203ENST00000409747 P2RY2P41231 377 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 DPP6P42658 865 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 RAD23BP54727 409 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 COG7P83436 770 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 RNF43Q68DV7 783 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 SDE2Q6IQ49 451 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 LPCAT2Q7L5N7 544 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 PGBD3Q8N328 593 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 SLC4A11Q8NBS3 891 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 TIGD1Q96MW7 591 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 EDEM2Q9BV94 578 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 DCLK3Q9C098 648 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 SMOC1Q9H4F8 434 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 ARMCX3Q9UH62 379 aaPredicted RBP15.5■□□□□ 0.07
CBX3-203ENST00000409747 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
CBX3-203ENST00000409747 COQ4Q9Y3A0 265 aa15.5■□□□□ 0.07
CBX3-203ENST00000409747 PLXND1Q9Y4D7 1925 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 SDK1Q7Z5N4 2213 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 PSMA7O14818 248 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 MAP3K13O43283 966 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 HOXB2P14652 356 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 BCKDHBP21953 392 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 NTSR1P30989 418 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 PPP1R2P41236 205 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 CBWD6Q4V339 395 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 CBWD3Q5JTY5 395 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 SPDYCQ5MJ68 293 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 CBWD5Q5RIA9 395 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 Q6ZNB5 142 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 TPGS1Q6ZTW0 290 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 SCD5Q86SK9 330 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 MIB1Q86YT6 1006 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 ANKRD52Q8NB46 1076 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 ENGASEQ8NFI3 743 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 ARID3AQ99856 593 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 RXFP3Q9NSD7 469 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 STRIP2Q9ULQ0 834 aa15.49■□□□□ 0.07
CBX3-203ENST00000409747 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
CBX3-203ENST00000409747 MDM4O15151 490 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 STC2O76061 302 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 KCNA4P22459 653 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 CHKAP35790 457 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 DHPSP49366 369 aaPredicted RBP15.48■□□□□ 0.07
CBX3-203ENST00000409747 DGKGP49619 791 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 BCAT1P54687 386 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 CUL2Q13617 745 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 RAB41Q5JT25 222 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 ANKRD40Q6AI12 368 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 TCEAL6Q6IPX3 200 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 RSRC2Q7L4I2 434 aaKnown RBP15.48■□□□□ 0.07
CBX3-203ENST00000409747 PIGZQ86VD9 579 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 TCEAL3Q969E4 200 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 METTL14Q9HCE5 456 aaKnown RBP15.48■□□□□ 0.07
CBX3-203ENST00000409747 ZDHHC4Q9NPG8 344 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 HESX1Q9UBX0 185 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 RASAL2Q9UJF2 1139 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 NUDT5Q9UKK9 219 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 THADAQ6YHU6 1953 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 NUP205Q92621 2012 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 TBXAS1P24557 533 aaPredicted RBP15.48■□□□□ 0.07
CBX3-203ENST00000409747 SGO2Q562F6 1265 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 CHPFQ8IZ52 775 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 TATDN2Q93075 761 aa15.48■□□□□ 0.07
CBX3-203ENST00000409747 LNP1A1A4G5 178 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 TM4SF5O14894 197 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 YWHAGP61981 247 aaKnown RBP eCLIP15.47■□□□□ 0.07
CBX3-203ENST00000409747 EFEMP1Q12805 493 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 E2F5Q15329 346 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 GOLGA7BQ2TAP0 167 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 DAB2IPQ5VWQ8 1189 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 SLC36A4Q6YBV0 504 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 ELOA2Q8IYF1 753 aaPredicted RBP15.47■□□□□ 0.07
CBX3-203ENST00000409747 RLN3Q8WXF3 142 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 SLC35C1Q96A29 364 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
CBX3-203ENST00000409747 CEP63Q96MT8 703 aa15.47■□□□□ 0.07
CBX3-203ENST00000409747 LSM14BQ9BX40 385 aaKnown RBP15.47■□□□□ 0.07
CBX3-203ENST00000409747 OLA1Q9NTK5 396 aaKnown RBP15.47■□□□□ 0.07
CBX3-203ENST00000409747 SPTBN2O15020 2390 aa15.46■□□□□ 0.07
CBX3-203ENST00000409747 GFRA2O00451 464 aa15.46■□□□□ 0.07
CBX3-203ENST00000409747 XPO1O14980 1071 aaKnown RBP15.46■□□□□ 0.07
CBX3-203ENST00000409747 TRIM24O15164 1050 aa15.46■□□□□ 0.07
CBX3-203ENST00000409747 AP5Z1O43299 807 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms