RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZC3H10Q96K80 434 aaKnown RBP4.85□□□□□ -1.63
PMS1-203ENST00000409593 RIPOR3Q96MK2 946 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 COLEC11Q9BWP8 271 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 TMOD4Q9NZQ9 345 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 MAN2B2Q9Y2E5 1009 aa4.85□□□□□ -1.63
PMS1-203ENST00000409593 SMIM35A0A1B0GVV1 85 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 ANO9A1A5B4 782 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 FYB1O15117 783 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 PRAMEF2O60811 474 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 DRD1P21728 446 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 ZNF81P51508 661 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 PICALMQ13492 652 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 MRNIPQ6NTE8 343 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 FBXO38Q6PIJ6 1188 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 USP17L6PQ6QN14 398 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 C16orf71Q8IYS4 520 aaPredicted RBP4.84□□□□□ -1.63
PMS1-203ENST00000409593 OSR1Q8TAX0 266 aaPredicted RBP4.84□□□□□ -1.63
PMS1-203ENST00000409593 GRAMD1AQ96CP6 724 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 EDC3Q96F86 508 aaKnown RBP4.84□□□□□ -1.63
PMS1-203ENST00000409593 SNX27Q96L92 541 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 FAM118BQ9BPY3 351 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 CINPQ9BW66 212 aaPredicted RBP4.84□□□□□ -1.63
PMS1-203ENST00000409593 PCDHAC1Q9H158 963 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 ZNF70Q9UC06 446 aaPredicted RBP4.84□□□□□ -1.63
PMS1-203ENST00000409593 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 TNFRSF18Q9Y5U5 241 aa4.84□□□□□ -1.63
PMS1-203ENST00000409593 RASA4BC9J798 803 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 CLIC1O00299 241 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 DSCR3O14972 297 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 RASA4O43374 803 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 PBX1P40424 430 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 NEK3P51956 506 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 GPC5P78333 572 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 TMEM63BQ5T3F8 832 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 RANBP10Q6VN20 620 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 C11orf96Q7Z7L8 435 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 OR2C3Q8N628 320 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 SUN3Q8TAQ9 357 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.83□□□□□ -1.64
PMS1-203ENST00000409593 SAP30LQ9HAJ7 183 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ARNT2Q9HBZ2 717 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ZMYND8Q9ULU4 1186 aaPredicted RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 VPS4AQ9UN37 437 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 SETD1BQ9UPS6 1966 aaKnown RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 FAM234BA2RU67 622 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ZSCAN9O15535 394 aaPredicted RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 GALNSP34059 522 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 TM4SF4P48230 202 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 MTAPQ13126 283 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 SLC14A1Q13336 389 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 BFSP2Q13515 415 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 FHL3Q13643 280 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 KLF9Q13886 244 aaPredicted RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 SLC35G1Q2M3R5 365 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ARHGAP15Q53QZ3 475 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 MORN5Q5VZ52 161 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ZNF813Q6ZN06 617 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 DPP9Q86TI2 863 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.83□□□□□ -1.64
PMS1-203ENST00000409593 PNISRQ8TF01 805 aaKnown RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 ZNF566Q969W8 418 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 PRR11Q96HE9 360 aaPredicted RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 CCDC138Q96M89 665 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 ADGRE3Q9BY15 652 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 CERS4Q9HA82 394 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 VPS45Q9NRW7 570 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 PHTF1Q9UMS5 762 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 SCAF8Q9UPN6 1271 aaKnown RBP4.83□□□□□ -1.64
PMS1-203ENST00000409593 PCDHB2Q9Y5E7 798 aa4.83□□□□□ -1.64
PMS1-203ENST00000409593 H3BNC9 293 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 TMIGD3P0DMS9 266 aaPredicted RBP4.82□□□□□ -1.64
PMS1-203ENST00000409593 PECAM1P16284 738 aaPredicted RBP4.82□□□□□ -1.64
PMS1-203ENST00000409593 GABRB3P28472 473 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 DGKQP52824 942 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 AK2P54819 239 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 ACOX1Q15067 660 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 P3H1Q32P28 736 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 AASDHQ4L235 1098 aaPredicted RBP4.82□□□□□ -1.64
PMS1-203ENST00000409593 CCDC181Q5TID7 509 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 KIAA0408Q6ZU52 694 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 HIC2Q96JB3 615 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 TNIP3Q96KP6 325 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 WDR24Q96S15 920 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 EIF2AQ9BY44 585 aaKnown RBP4.82□□□□□ -1.64
PMS1-203ENST00000409593 PRSS22Q9GZN4 317 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
PMS1-203ENST00000409593 PODXLO00592 558 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 KCNQ3O43525 872 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 EGR1P18146 543 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 SLC5A2P31639 672 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 MMP13P45452 471 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 JAK3P52333 1124 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 RAE1P78406 368 aaKnown RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 KPNB1Q14974 876 aaKnown RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 ETFDHQ16134 617 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms