RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 PRR33A8MZF0 331 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 E7ENQ6 273 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 ZSCAN12O43309 604 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 MOSPD3O75425 235 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 RALAP11233 206 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 KRT3P12035 628 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 CEBPBP17676 345 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 YWHAGP61981 247 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 KIF5AQ12840 1032 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 HTR4Q13639 388 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 BTBD8Q5XKL5 378 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 DCUN1D2Q6PH85 259 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 PARM1Q6UWI2 310 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 BEND5Q7L4P6 421 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 TADA2BQ86TJ2 420 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 ALYREFQ86V81 257 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 TMC8Q8IU68 726 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 RFFLQ8WZ73 363 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 FGF14Q92915 247 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 CDK5RAP1Q96SZ6 601 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 TSGA10Q9BZW7 698 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 POPDC2Q9HBU9 364 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 ABCC13Q9NSE7 274 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 CLIC5Q9NZA1 410 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 GMIPQ9P107 970 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
TSPAN4-208ENST00000409531 A0A0A6YYK5 440 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 TCRBV5S1A1TA0A578 114 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 BTNL10A8MVZ5 291 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 CAPN9O14815 690 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 PJA2O43164 708 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 CCP110O43303 1012 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 KRT86O43790 486 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 ZDHHC11BP0C7U3 371 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 GJA1P17302 382 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 DESP17661 470 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 GABRR2P28476 465 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 MAMLD1Q13495 774 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 BSPRYQ5W0U4 402 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 POTEHQ6S545 545 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 BHLHA9Q7RTU4 235 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 SHKBP1Q8TBC3 707 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 CALR3Q96L12 384 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 RPP25Q9BUL9 199 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 ZNF334Q9HCZ1 680 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 RRN3Q9NYV6 651 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 CTTNBP2NLQ9P2B4 639 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 CHORDC1Q9UHD1 332 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 LCMT1Q9UIC8 334 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 DUSP12Q9UNI6 340 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.36
TSPAN4-208ENST00000409531 TECTAO75443 2155 aa17.27■□□□□ 0.35
TSPAN4-208ENST00000409531 A0A1W2PQH9 124 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 A0A1W2PRU2 124 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 TMEM221A6NGB7 291 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 M0R296 226 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 NRG2O14511 850 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 DAB1O75553 588 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 F11P03951 625 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 TUBP50607 506 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 PPP1R15BQ5SWA1 713 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ZNF662Q6ZS27 426 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 GAREM2Q75VX8 874 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 PHLDB2Q86SQ0 1253 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ZNF276Q8N554 614 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ST13P5Q8NFI4 369 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 RNF139Q8WU17 664 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 NDRG1Q92597 394 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ARHGEF26Q96DR7 871 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ASIC4Q96FT7 647 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 PIWIL1Q96J94 861 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 MCEEQ96PE7 176 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 NUP85Q9BW27 656 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ATXN3LQ9H3M9 355 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 IL21Q9HBE4 155 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 OLA1Q9NTK5 396 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ZMYM5Q9UJ78 669 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 TMEM59LQ9UK28 342 aa17.26■□□□□ 0.35
TSPAN4-208ENST00000409531 ZNF840PA6NDX5 716 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 SOBPA7XYQ1 873 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 GRAP2O75791 330 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 ABL1P00519 1130 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 NCAM1P13591 858 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 PFKLP17858 780 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 MATKP42679 507 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 RNASE9P60153 205 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 TCEAL1Q15170 157 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 TEAD2Q15562 447 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 IFI16Q16666 785 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 ARHGAP29Q52LW3 1261 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 ARHGAP15Q53QZ3 475 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 HECTD3Q5T447 861 aa17.25■□□□□ 0.35
TSPAN4-208ENST00000409531 HFE2Q6ZVN8 426 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms