RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CISD3P0C7P0 127 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 ZDHHC11BP0C7U3 371 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 DLATP10515 647 aaKnown RBP17.64■□□□□ 0.41
CHMP3-203ENST00000409225 ABCG1P45844 678 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 PGFP49763 221 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 RRAGBQ5VZM2 374 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 METTL3Q86U44 580 aaKnown RBP17.64■□□□□ 0.41
CHMP3-203ENST00000409225 KLF16Q9BXK1 252 aaPredicted RBP17.64■□□□□ 0.41
CHMP3-203ENST00000409225 MKRN2Q9H000 416 aaKnown RBP17.64■□□□□ 0.41
CHMP3-203ENST00000409225 ITM2CQ9NQX7 267 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 PLK2Q9NYY3 685 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 IL37Q9NZH6 218 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 MARK1Q9P0L2 795 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 NXF1Q9UBU9 619 aaKnown RBP17.64■□□□□ 0.41
CHMP3-203ENST00000409225 PCDHGB2Q9Y5G2 931 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 METTL12A8MUP2 240 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 C1QL1O75973 258 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 FAM163BP0C2L3 166 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 TNNI1P19237 187 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 TPMTP51580 245 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 DBX2Q6ZNG2 339 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 CACUL1Q86Y37 369 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 PDCD7Q8N8D1 485 aaKnown RBP17.63■□□□□ 0.41
CHMP3-203ENST00000409225 RDH13Q8NBN7 331 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 SLC39A7Q92504 469 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 SNX19Q92543 992 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 KIF2CQ99661 725 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 DMAP1Q9NPF5 467 aaPredicted RBP17.63■□□□□ 0.41
CHMP3-203ENST00000409225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHMP3-203ENST00000409225 PANK4Q9NVE7 773 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 HSPBP1Q9NZL4 362 aa17.63■□□□□ 0.41
CHMP3-203ENST00000409225 LSM7Q9UK45 103 aaKnown RBP17.63■□□□□ 0.41
CHMP3-203ENST00000409225 AP1G2O75843 785 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 OXTRP30559 389 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 IL12RB1P42701 662 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 CSNK1EP49674 416 aaKnown RBP17.62■□□□□ 0.41
CHMP3-203ENST00000409225 SUZ12Q15022 739 aaKnown RBP17.62■□□□□ 0.41
CHMP3-203ENST00000409225 PAQR9Q6ZVX9 377 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 TMPRSS6Q8IU80 811 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 SIPA1Q96FS4 1042 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
CHMP3-203ENST00000409225 SHROOM3Q8TF72 1996 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 FAM92AA1XBS5 289 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 FRMD3A2A2Y4 597 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 TNFSF14O43557 240 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 SYNCRIPO60506 623 aaKnown RBP17.61■□□□□ 0.41
CHMP3-203ENST00000409225 CLSTN1O94985 981 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 ITPKBP27987 946 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 MYL6P60660 151 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 GOLGA8FQ08AF8 430 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 GOLGA8DPQ0D2H9 430 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 SMAD1Q15797 465 aaKnown RBP17.61■□□□□ 0.41
CHMP3-203ENST00000409225 KIF19Q2TAC6 998 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 FAM124AQ86V42 546 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 PRCCQ92733 491 aaPredicted RBP17.61■□□□□ 0.41
CHMP3-203ENST00000409225 SMARCD1Q96GM5 515 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 CGRRF1Q99675 332 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 SMYD3Q9H7B4 428 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 TLR8Q9NR97 1041 aaKnown RBP17.61■□□□□ 0.41
CHMP3-203ENST00000409225 COMMD8Q9NX08 183 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 SLCO1B1Q9Y6L6 691 aa17.61■□□□□ 0.41
CHMP3-203ENST00000409225 PLK4O00444 970 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 ACADMP11310 421 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 CDH8P55286 799 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 TRPC3Q13507 836 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 DHRS13Q6UX07 377 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 C1orf216Q8TAB5 229 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 CCDC127Q96BQ5 260 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 P2RY11Q96G91 374 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 SMOQ99835 787 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 NUP58Q9BVL2 599 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 KIAA1586Q9HCI6 787 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 THAP10Q9P2Z0 257 aaPredicted RBP17.6■□□□□ 0.41
CHMP3-203ENST00000409225 SNX11Q9Y5W9 270 aa17.6■□□□□ 0.41
CHMP3-203ENST00000409225 TK2O00142 265 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 MDM4O15151 490 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 ATXN7O15265 892 aaPredicted RBP17.59■□□□□ 0.41
CHMP3-203ENST00000409225 BEST1O76090 585 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 HLA-EP13747 358 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 ATP5C1P36542 298 aaKnown RBP17.59■□□□□ 0.41
CHMP3-203ENST00000409225 TXLNAP40222 546 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 AFF3P51826 1226 aaKnown RBP17.59■□□□□ 0.41
CHMP3-203ENST00000409225 SNRNP35Q16560 246 aaKnown RBP17.59■□□□□ 0.41
CHMP3-203ENST00000409225 GEN1Q17RS7 908 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 SCARA5Q6ZMJ2 495 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 BRAPQ7Z569 592 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 FUKQ8N0W3 1084 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 ZMIZ2Q8NF64 920 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 HPS3Q969F9 1004 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 PANK2Q9BZ23 570 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 OSER1Q9NX31 292 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 FBXO10Q9UK96 956 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 NUDT5Q9UKK9 219 aa17.59■□□□□ 0.41
CHMP3-203ENST00000409225 KCNK3O14649 394 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 CCDC130P13994 396 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 PLA2G2AP14555 144 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 STAT6P42226 847 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 GRK6P43250 576 aa17.58■□□□□ 0.4
CHMP3-203ENST00000409225 COPAP53621 1224 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms