RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 GGA2Q9UJY4 613 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 STARD13Q9Y3M8 1113 aa8.63□□□□□ -1.03
SNX13-201ENST00000409076 LACTBL1A8MY62 500 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 STX16-NPEPL1H3BU86 382 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 TBXAS1P24557 533 aaPredicted RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 SLC8A3P57103 927 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 ZNF460Q14592 562 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 PCSK7Q16549 785 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 LGSNQ5TDP6 509 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 CRELD2Q6UXH1 353 aaPredicted RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 C15orf52Q6ZUT6 534 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 FAM183BPQ6ZVS7 135 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 LCA5Q86VQ0 697 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 WDR75Q8IWA0 830 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 KBTBD2Q8IY47 623 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 HPDLQ96IR7 371 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 MFSD14AQ96MC6 490 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 TUBGCP5Q96RT8 1024 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 EBF3Q9H4W6 596 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 MINDY3Q9H8M7 445 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 GGA3Q9NZ52 723 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 SLC39A10Q9ULF5 831 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 TPP1O14773 563 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 PPEF2O14830 753 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 SNRPAP09012 282 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 SLC34A1Q06495 639 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 PIGHQ14442 188 aaPredicted RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 FAM43BQ6ZT52 329 aaPredicted RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 ZNF483Q8TF39 744 aaPredicted RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 PEBP4Q96S96 227 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 LRMDAQ9H2I8 198 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 STK32BQ9NY57 414 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 BTBD7Q9P203 1132 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 ZNRF3Q9ULT6 936 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 ATXN2Q99700 1313 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 PHLPP1O60346 1717 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 LAMA2P24043 3122 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 SCN7AQ01118 1682 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 CAPN8A6NHC0 703 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 CLDN5O00501 218 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 BUD23O43709 281 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 RGS20O76081 388 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 METTL18O95568 372 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 RAG1P15918 1043 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 DESP17661 470 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 UBA1P22314 1058 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 PEX2P28328 305 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 PTPN11Q06124 597 aaPredicted RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 GALNTL6Q49A17 601 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 TMEM198Q66K66 360 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 VSIG10LQ86VR7 867 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 NUF2Q9BZD4 464 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 GRIP2Q9C0E4 1043 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 CXCL16Q9H2A7 254 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 XAB2Q9HCS7 855 aaKnown RBP8.62□□□□□ -1.03
SNX13-201ENST00000409076 ETNK2Q9NVF9 386 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 ASNSD1Q9NWL6 643 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 RPS6KL1Q9Y6S9 549 aa8.62□□□□□ -1.03
SNX13-201ENST00000409076 CCL22O00626 93 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 PFDN1O60925 122 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 KRT38O76015 456 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 STAMBPO95630 424 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 RARBP10826 455 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 CD1EP15812 388 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ACO1P21399 889 aaKnown RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 GPD1P21695 349 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 EPHA3P29320 983 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 TGFB2P61812 414 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 AP2B1P63010 937 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 KLF1Q13351 362 aaPredicted RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 BLMHQ13867 455 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 HSP90AA5PQ58FG0 334 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 PPM1LQ5SGD2 360 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 SLFN12LQ6IEE8 588 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 WDTC1Q8N5D0 677 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 PCDH20Q8N6Y1 951 aaKnown RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 EDEM1Q92611 657 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 C20orf27Q9GZN8 174 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 COPS7BQ9H9Q2 264 aaPredicted RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 COMMD10Q9Y6G5 202 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ALOX15BO15296 676 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 TBC1D12O60347 775 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 STAG3L1P0CL83 205 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 TXNP10599 105 aaKnown RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 HDCP19113 662 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ATP6V1C1P21283 382 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 YWHAEP62258 255 aaKnown RBP8.61□□□□□ -1.03
SNX13-201ENST00000409076 TREML2Q5T2D2 321 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ATG16L1Q676U5 607 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 PLEKHA7Q6IQ23 1121 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ENOSF1Q7L5Y1 443 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 C10orf107Q8IVU9 208 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 MAP7D3Q8IWC1 876 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ULK2Q8IYT8 1036 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 ZNF280CQ8ND82 737 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 APOPT1Q96IL0 206 aa8.61□□□□□ -1.03
SNX13-201ENST00000409076 TSNARE1Q96NA8 513 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms