RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NEDD8-MDP1E9PL57 170 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 K7EQS6 105 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 BIN1O00499 593 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 SCAMP3O14828 347 aaKnown RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 NPC1O15118 1278 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 CACNG3O60359 315 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 TULP3O75386 442 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 EPN2O95208 641 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 GBP1P32455 592 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 TKTL1P51854 596 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 SPEM2Q0P670 501 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 GAB4Q2WGN9 574 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 RAB41Q5JT25 222 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 C10orf76Q5T2E6 689 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 NAIF1Q69YI7 327 aaPredicted RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 TMEM270Q6UE05 265 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 MIB1Q86YT6 1006 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 FAM114A1Q8IWE2 563 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 TRIM59Q8IWR1 403 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 ZNF513Q8N8E2 541 aaPredicted RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 ZNF557Q8N988 423 aaPredicted RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 KCTD13Q8WZ19 329 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 DDX1Q92499 740 aaKnown RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 EZH1Q92800 747 aaPredicted RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 TATDN2Q93075 761 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 ZC3H10Q96K80 434 aaKnown RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 NMUR1Q9HB89 426 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 CNGB3Q9NQW8 809 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 SEMA4GQ9NTN9 838 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 DNAJC17Q9NVM6 304 aaKnown RBP9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 DLL3Q9NYJ7 618 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 MARCH2Q9P0N8 246 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 PCDHB4Q9Y5E5 795 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 KIAA1549LQ6ZVL6 1849 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 CEP250Q9BV73 2442 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 SPAG17Q6Q759 2223 aa9.52□□□□□ -0.88
SNORD88A-201ENST00000408314 M0QYV0 167 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 O00370 1275 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 MED7O43513 233 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 STC2O76061 302 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 FBXO21O94952 628 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 KLF8O95600 359 aaPredicted RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 LATS1O95835 1130 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 TYRP14679 529 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 TIE1P35590 1138 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC6A11P48066 632 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 PXNP49023 591 aaPredicted RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 HARS2P49590 506 aaKnown RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 DGKGP49619 791 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 PDE4CQ08493 712 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 ADIGQ0VDE8 80 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 EFEMP1Q12805 493 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 KCNH2Q12809 1159 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 LRMPQ12912 555 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 SRSF5Q13243 272 aaKnown RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 STARD3Q14849 445 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 MEA1Q16626 185 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 TPD52L1Q16890 204 aaPredicted RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 RSPO4Q2I0M5 234 aaPredicted RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 PM20D1Q6GTS8 502 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 ISM2Q6H9L7 571 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 ANO7Q6IWH7 933 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 LCLAT1Q6UWP7 414 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 PRR23CQ6ZRP0 262 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 SCD5Q86SK9 330 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 TTC30AQ86WT1 665 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 CPXM2Q8N436 756 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 CCDC33Q8N5R6 958 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 ALLCQ8N6M5 410 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 UBR7Q8N806 425 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 MLKLQ8NB16 471 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 TXNDC5Q8NBS9 432 aaKnown RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 IRGQQ8WZA9 623 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 RMDN1Q96DB5 314 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 HSFY1Q96LI6 401 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 SRRTQ9BXP5 876 aaKnown RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 IRX2Q9BZI1 471 aaPredicted RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 ULBP1Q9BZM6 244 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 VPS45Q9NRW7 570 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 ABCC13Q9NSE7 274 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 C2orf42Q9NWW7 574 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 OSER1Q9NX31 292 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 BCCIPQ9P287 314 aaKnown RBP eCLIP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 RWDD2AQ9UIY3 292 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 STARD13Q9Y3M8 1113 aa9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 HBS1LQ9Y450 684 aaKnown RBP9.52□□□□□ -0.89
SNORD88A-201ENST00000408314 CACNA1AO00555 2505 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 SLC12A8A0AV02 714 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 GFRA2O00451 464 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 GADD45BO75293 160 aaPredicted RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 TBX18O95935 607 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 NTSR1P30989 418 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 CORO1AP31146 461 aaKnown RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 MPLP40238 635 aa9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 KIR2DL1P43626 348 aaPredicted RBP9.51□□□□□ -0.89
SNORD88A-201ENST00000408314 ACADSBP45954 432 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms