RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 COL28A1Q2UY09 1125 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 SOWAHCQ53LP3 525 aaPredicted RBP12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 FAM35AQ86V20 835 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 PNPLA1Q8N8W4 532 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 XXYLT1Q8NBI6 393 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 LINC00301Q8NCQ3 95 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 SETD7Q8WTS6 366 aaKnown RBP12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 DNASE2BQ8WZ79 361 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 ACOX2Q99424 681 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 PANK2Q9BZ23 570 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 TNMDQ9H2S6 317 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 CD248Q9HCU0 757 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 HCN2Q9UL51 889 aa12.98□□□□□ -0.33
APOBEC3B-204ENST00000407298 PRRT4C9JH25 899 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 TRIM24O15164 1050 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 CLSTN1O94985 981 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 F13A1P00488 732 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 ZSCAN22P10073 491 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 NCAM1P13591 858 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 MYL6P60660 151 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 SUZ12Q15022 739 aaKnown RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 TPGS1Q6ZTW0 290 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 TADA2BQ86TJ2 420 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 GALNT15Q8N3T1 639 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 UCMAQ8WVF2 138 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 KLF16Q9BXK1 252 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 CUEDC2Q9H467 287 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 VRTNQ9H8Y1 702 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 PRDM16Q9HAZ2 1276 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 CACNA2D2Q9NY47 1150 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 WSB2Q9NYS7 404 aaPredicted RBP12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 DKK4Q9UBT3 224 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 PCOLCE2Q9UKZ9 415 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 NME7Q9Y5B8 376 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 PCDHGB2Q9Y5G2 931 aa12.97□□□□□ -0.33
APOBEC3B-204ENST00000407298 APC2O95996 2303 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 UBE4BO95155 1302 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 CBFA2T3O75081 653 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 MAOBP27338 520 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 MATKP42679 507 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 PLA2G4AP47712 749 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 CYP2J2P51589 502 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 KLHDC10Q6PID8 442 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 TMPRSS7Q7RTY8 843 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 NUP58Q9BVL2 599 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 GAREM1Q9H706 876 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 KRT82Q9NSB4 513 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 RAD54BQ9Y620 910 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.33
APOBEC3B-204ENST00000407298 URB1O60287 2271 aaKnown RBP12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 BCAT2O15382 392 aaPredicted RBP12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 FLRT2O43155 660 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 CILPO75339 1184 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 YEATS4O95619 227 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 ACADMP11310 421 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 CDH8P55286 799 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 BIRC3Q13489 604 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 STK38Q15208 465 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 PAQR9Q6ZVX9 377 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 SLCO6A1Q86UG4 719 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 MDM1Q8TC05 714 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 RHBDD1Q8TEB9 315 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 HNRNPLLQ8WVV9 542 aaKnown RBP12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 PRCCQ92733 491 aaPredicted RBP12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 WBP2Q969T9 261 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 SIPA1Q96FS4 1042 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 CDK5RAP1Q96SZ6 601 aaKnown RBP12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 PCED1AQ9H1Q7 454 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 SMYD3Q9H7B4 428 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 CSNK1G1Q9HCP0 422 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 SCML2Q9UQR0 700 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 LOC400499M0QZD8 3231 aa12.95□□□□□ -0.34
APOBEC3B-204ENST00000407298 FLNBO75369 2602 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms