RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SERPINB12Q96P63 405 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 GAD1Q99259 594 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 BCO2Q9BYV7 579 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 CWH43Q9H720 699 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 PPCSQ9HAB8 311 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 LZTS1Q9Y250 596 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 USTQ9Y2C2 406 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 DERAQ9Y315 318 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 RRP15Q9Y3B9 282 aaKnown RBP13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 HCFC2Q9Y5Z7 792 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 R4GN57 208 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 GMNCA6NCL1 334 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 RASGRF2O14827 1237 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 FAM107AO95990 144 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 KRT19P08727 400 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 CXCL8P10145 99 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 RALAP11233 206 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 VDRP11473 427 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 CD58P19256 250 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 AOC1P19801 751 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 HPDP32754 393 aaPredicted RBP13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 AFF1P51825 1210 aaKnown RBP13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 RBP5P82980 135 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 PDCLQ13371 301 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 PUM1Q14671 1186 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 CWF19L1Q69YN2 538 aaKnown RBP13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 KCNT2Q6UVM3 1135 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 ALKAL1Q6UXT8 129 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 URGCPQ8TCY9 931 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 C1orf54Q8WWF1 131 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 RSPH1Q8WYR4 309 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 TTC25Q96NG3 672 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 SYNCQ9H7C4 482 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 PLEKHA5Q9HAU0 1116 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 KANSL3Q9P2N6 904 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 CHORDC1Q9UHD1 332 aaPredicted RBP13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 C2CD2Q9Y426 696 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 ANK1P16157 1881 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 ZNF292O60281 2723 aa13.48□□□□□ -0.25
SMARCB1-203ENST00000407082 EPG5Q9HCE0 2579 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 RIPK2O43353 540 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 CLASP2O75122 1294 aaKnown RBP13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 TCEA3O75764 348 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 RNF8O76064 485 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 CXCL14O95715 111 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 POMCP01189 267 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 KRT1P04264 644 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 KRT3P12035 628 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 CD19P15391 556 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 SCNN1GP51170 649 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 MAGOHP61326 146 aaKnown RBP13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 PLCB3Q01970 1234 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 SNX1Q13596 522 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 SLC29A2Q14542 456 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 TMEM132DQ14C87 1099 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 CNGA2Q16280 664 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 NLRP14Q86W24 1093 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 RELL1Q8IUW5 271 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 ZDHHC14Q8IZN3 488 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 SIX5Q8N196 739 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 RIBC1Q8N443 379 aaPredicted RBP13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 ZBTB9Q96C00 473 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 RTP3Q9BQQ7 232 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 XYLT2Q9H1B5 865 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 CXCL16Q9H2A7 254 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 ASNSD1Q9NWL6 643 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 MIOSQ9NXC5 875 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
SMARCB1-203ENST00000407082 TPRP12270 2363 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 SMIM28A0A1B0GU29 152 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 TCRBV7S2A1N4TA0A589 114 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 LACTBL1A8MY62 500 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 INPPL1O15357 1258 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 THP07101 528 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 NPR3P17342 541 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 ASPAP45381 313 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 KCNJ1P48048 391 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 CCT5P48643 541 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 NR1H3Q13133 447 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 STAT4Q14765 748 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 WDR72Q3MJ13 1102 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 SPOCD1Q6ZMY3 1216 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 GSTCDQ8NEC7 633 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 OR2W6PQ8NHA6 318 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 P3H4Q92791 437 aa13.46□□□□□ -0.25
SMARCB1-203ENST00000407082 ACSF2Q96CM8 615 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms