RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MTMR10Q9NXD2 777 aa25.64■■□□□ 1.69
DNMT3A-206ENST00000406659 TDRD15B5MCY1 1934 aaKnown RBP25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 BCLAF3A2AJT9 711 aaKnown RBP25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 KCNN4O15554 427 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 ZBED1O96006 694 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 ARL4AP40617 200 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 RABGGTBP53611 331 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 HP1BP3Q5SSJ5 553 aaPredicted RBP25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 FOXR1Q6PIV2 292 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 PSTKQ8IV42 348 aaKnown RBP25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 NT5C3BQ969T7 300 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 CSPG4P5Q96PW8 444 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 KCNK16Q96T55 309 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 RTP3Q9BQQ7 232 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 MAGEB5Q9BZ81 275 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 PHACTR1Q9C0D0 580 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 CNGB3Q9NQW8 809 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 RGS18Q9NS28 235 aa25.63■■□□□ 1.69
DNMT3A-206ENST00000406659 DNAH12Q6ZR08 3092 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 SYNJ2BP-COX16A0A087WUM0 186 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 M0QYT0 321 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 INHAP05111 366 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 DAOAP59103 153 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 FASTKD3Q14CZ7 662 aaKnown RBP25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 DCLRE1AQ6PJP8 1040 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 CDKL3Q8IVW4 592 aaPredicted RBP25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 ZMIZ2Q8NF64 920 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 MDM1Q8TC05 714 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 HASPINQ8TF76 798 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 MYLPFQ96A32 169 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 VPS37BQ9H9H4 285 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 PPANQ9NQ55 473 aaKnown RBP25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 COX16Q9P0S2 106 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 PAK5Q9P286 719 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 XPO7Q9UIA9 1087 aaKnown RBP25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 PRDM4Q9UKN5 801 aa25.62■■□□□ 1.69
DNMT3A-206ENST00000406659 ARHGEF37A1IGU5 675 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 M0QZQ0 153 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 NRP1O14786 923 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 CAPN9O14815 690 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 NR2C2P49116 596 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 NRLP54845 237 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 DEUP1Q05D60 604 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 CCDC38Q502W7 563 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 RAB41Q5JT25 222 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 CD300LGQ6UXG3 332 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 HFE2Q6ZVN8 426 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 RSPH1Q8WYR4 309 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 HMX1Q9NP08 348 aaPredicted RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 A0A1W2PQ45 241 aaPredicted RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 A0A1W2PQY0 241 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 NDUFAB1O14561 156 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 RBL1P28749 1068 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 CACNA2D1P54289 1103 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 PITX1P78337 314 aaPredicted RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 NME3Q13232 169 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 INTS6LQ5JSJ4 861 aaKnown RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 OTUD1Q5VV17 481 aaPredicted RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 SYPL2Q5VXT5 272 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 GLB1LQ6UWU2 654 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 THEM5Q8N1Q8 247 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 PYROXD2Q8N2H3 581 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 ARHGEF2Q92974 986 aaKnown RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 CENPTQ96BT3 561 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 RTP4Q96DX8 246 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 STARD7Q9NQZ5 370 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 RCOR3Q9P2K3 495 aaPredicted RBP25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 LGALS13Q9UHV8 139 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 NAALADL1Q9UQQ1 740 aa25.61■■□□□ 1.69
DNMT3A-206ENST00000406659 TCRBV7S3A2A0A539 114 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 E7EVH7 732 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 INPPL1O15357 1258 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 CDH16O75309 829 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 EOMESO95936 686 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 GAD2Q05329 585 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 XRCC4Q13426 336 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 FNBP1LQ5T0N5 605 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 LHX8Q68G74 356 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 FAM171BQ6P995 826 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 GPRIN1Q7Z2K8 1008 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 RTN4RL1Q86UN2 441 aaPredicted RBP25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 EXOC3L1Q86VI1 746 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 ANKMY2Q8IV38 441 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 CCDC13Q8IYE1 715 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 PYROXD1Q8WU10 500 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 PRDM16Q9HAZ2 1276 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 TMEM30AQ9NV96 361 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 CTNNAL1Q9UBT7 734 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 RSPH14Q9UHP6 348 aa25.6■■□□□ 1.69
DNMT3A-206ENST00000406659 EXOC1LA0A1B0GW35 172 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 YJEFN3A6XGL0 299 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 E7ENQ6 273 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 MAP3K6O95382 1288 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 USP17L7P0C7H9 530 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 CHN1P15882 459 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 GOT1P17174 413 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 AMPD1P23109 780 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 YY1P25490 414 aa25.59■■□□□ 1.69
DNMT3A-206ENST00000406659 RNASELQ05823 741 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms