RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 GPD2P43304 727 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 MPZL3Q6UWV2 235 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 MTMR14Q8NCE2 650 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 PCDH19Q8TAB3 1148 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 CLEC4CQ8WTT0 213 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 NIFKQ9BYG3 293 aaKnown RBP12.43□□□□□ -0.42
RBM39-206ENST00000403542 POPDC2Q9HBU9 364 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 KRT82Q9NSB4 513 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 BTBD7Q9P203 1132 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
RBM39-206ENST00000403542 C6orf222P0C671 652 aaPredicted RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 RALGPS1Q5JS13 557 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 IZUMO2Q6UXV1 221 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 CYP4V2Q6ZWL3 525 aaPredicted RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 PPFIBP2Q8ND30 876 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 SEPT1Q8WYJ6 367 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 RNF157Q96PX1 679 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 PANX3Q96QZ0 392 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 PHACTR1Q9C0D0 580 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 DHX35Q9H5Z1 703 aaKnown RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 SPATS2LQ9NUQ6 558 aaKnown RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 ETNK2Q9NVF9 386 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 PPM1HQ9ULR3 514 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 C2CD2Q9Y426 696 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 COL11A1P12107 1806 aaPredicted RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 HMX2A2RU54 273 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 ABLIM1O14639 778 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 MAP3K7O43318 606 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 VTNP04004 478 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 STAG3L1P0CL83 205 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 ACADSP16219 412 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 IL4RP24394 825 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 CDH5P33151 784 aaPredicted RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 SLC18A2Q05940 514 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 PPP1R2P3Q6NXS1 205 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 ACOT1Q86TX2 421 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 PQLC3Q8N755 202 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 SSU72Q9NP77 194 aaKnown RBP12.42□□□□□ -0.42
RBM39-206ENST00000403542 SEPT10Q9P0V9 454 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 CNTN3Q9P232 1028 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 SLC7A8Q9UHI5 535 aa12.42□□□□□ -0.42
RBM39-206ENST00000403542 SLC15A5A6NIM6 579 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 SKIP12755 728 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 ZNF143P52747 638 aaPredicted RBP12.41□□□□□ -0.42
RBM39-206ENST00000403542 EFNA5P52803 228 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 PGGT1BP53609 377 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 MRPS35P82673 323 aaKnown RBP12.41□□□□□ -0.42
RBM39-206ENST00000403542 EML3Q32P44 896 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 PPM1JQ5JR12 505 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 PMF1Q6P1K2 205 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 CRLF3Q8IUI8 442 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 SCUBE1Q8IWY4 988 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 ULK2Q8IYT8 1036 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 ZNF398Q8TD17 642 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 NDRG1Q92597 394 aaKnown RBP12.41□□□□□ -0.42
RBM39-206ENST00000403542 HPDLQ96IR7 371 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 PPCSQ9HAB8 311 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 ZNF358Q9NW07 568 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 ARID2Q68CP9 1835 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 CCDC78A2IDD5 438 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 WDR27A2RRH5 827 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 APOL1O14791 398 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 AP1G2O75843 785 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 STIP1P31948 543 aaKnown RBP12.41□□□□□ -0.42
RBM39-206ENST00000403542 CACNA2D1P54289 1103 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 CCDC14Q49A88 953 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 FAM160B1Q5W0V3 765 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 PYROXD2Q8N2H3 581 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 SNRNP25Q9BV90 132 aaKnown RBP12.41□□□□□ -0.42
RBM39-206ENST00000403542 KLC2Q9H0B6 622 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 MAN1C1Q9NR34 630 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 STK32BQ9NY57 414 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 SCOCQ9UIL1 159 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
RBM39-206ENST00000403542 A0A087WZ62 844 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 C2CD4BA6NLJ0 364 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 ZBTB42B2RXF5 422 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 E7ENQ6 273 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 SPECC1L-ADORA2AF8WAN1 911 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 SMAPO00193 183 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 PPP1R12AO14974 1030 aaPredicted RBP12.4□□□□□ -0.42
RBM39-206ENST00000403542 STK10O94804 968 aaKnown RBP12.4□□□□□ -0.42
RBM39-206ENST00000403542 LMNAP02545 664 aaKnown RBP12.4□□□□□ -0.42
RBM39-206ENST00000403542 SLC10A2Q12908 348 aaPredicted RBP12.4□□□□□ -0.42
RBM39-206ENST00000403542 GOLGA7BQ2TAP0 167 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 GLRA4Q5JXX5 417 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 FOXB2Q5VYV0 432 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 FAM136AQ96C01 138 aa12.4□□□□□ -0.42
RBM39-206ENST00000403542 MTBPQ96DY7 904 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms