RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 FAM92AA1XBS5 289 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 GOLGA6L4A6NEF3 574 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 MAPK13O15264 365 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 HYAL3O43820 417 aaPredicted RBP13.03□□□□□ -0.32
PRAME-204ENST00000403441 CACNG3O60359 315 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 OPHN1O60890 802 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 KIF20AO95235 890 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 TOP3BO95985 862 aaKnown RBP13.03□□□□□ -0.32
PRAME-204ENST00000403441 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 WASP42768 502 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 CASP4P49662 377 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 SEMA3BQ13214 749 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 PAQR9Q6ZVX9 377 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 ACOT1Q86TX2 421 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 SLC2A14Q8TDB8 520 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 BBS2Q9BXC9 721 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
PRAME-204ENST00000403441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.03□□□□□ -0.321e-9■■■■■ 57.8
PRAME-204ENST00000403441 WDR35Q9P2L0 1181 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 STARD13Q9Y3M8 1113 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 CACNA1EQ15878 2313 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 ATRXP46100 2492 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 SPEGQ15772 3267 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 PI4KAP42356 2102 aa13.03□□□□□ -0.32
PRAME-204ENST00000403441 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 LRRIQ3A6PVS8 624 aaPredicted RBP13.02□□□□□ -0.33
PRAME-204ENST00000403441 H0Y626 953 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 TRIM16O95361 564 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 SYPP08247 313 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 CCDC130P13994 396 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 TYRP14679 529 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 MAP3K7CLP57077 242 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 ENPEPQ07075 957 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 EGFLAMQ63HQ2 1017 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 HTR3DQ70Z44 454 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 ZC3H3Q8IXZ2 948 aaKnown RBP13.02□□□□□ -0.33
PRAME-204ENST00000403441 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 PARD3BQ8TEW8 1205 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 CCDC47Q96A33 483 aaKnown RBP13.02□□□□□ -0.33
PRAME-204ENST00000403441 HSPA12BQ96MM6 686 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 CAPN10Q9HC96 672 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 FSCN3Q9NQT6 498 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 CYP8B1Q9UNU6 501 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 AKAP13Q12802 2813 aa13.02□□□□□ -0.33
PRAME-204ENST00000403441 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 IGHV1OR15-9A0A0B4J2B8 117 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 TRIM24O15164 1050 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 NDUFS2O75306 463 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 NR3C1P04150 777 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 FAM200BP0CF97 657 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 NDUFV2P19404 249 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 ATP5C1P36542 298 aaKnown RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 NDST1P52848 882 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 ORC1Q13415 861 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 HNRNPDQ14103 355 aaKnown RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 C1orf220Q5T0J3 134 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 SYCP2LQ5T4T6 812 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 TPGS1Q6ZTW0 290 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 TADA2BQ86TJ2 420 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 UNC93AQ86WB7 457 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 MIB1Q86YT6 1006 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 MINDY1Q8N5J2 469 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 TAF4BQ92750 862 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 SMOQ99835 787 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 GTPBP4Q9BZE4 634 aaKnown RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 DNAI2Q9GZS0 605 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 SDCBP2Q9H190 292 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 FAM124BQ9H5Z6 455 aaPredicted RBP13.01□□□□□ -0.33
PRAME-204ENST00000403441 CSNK1G1Q9HCP0 422 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 CYLDQ9NQC7 956 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 FAM49BQ9NUQ9 324 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 MARK1Q9P0L2 795 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 SUSD2Q9UGT4 822 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 MSRB2Q9Y3D2 182 aa13.01□□□□□ -0.33
PRAME-204ENST00000403441 SRRM3A6NNA2 597 aaPredicted RBP13□□□□□ -0.33
PRAME-204ENST00000403441 CYP26A1O43174 497 aa13□□□□□ -0.33
PRAME-204ENST00000403441 BEST1O76090 585 aa13□□□□□ -0.33
PRAME-204ENST00000403441 VNN1O95497 513 aa13□□□□□ -0.33
PRAME-204ENST00000403441 TBX18O95935 607 aa13□□□□□ -0.33
PRAME-204ENST00000403441 C4BPAP04003 597 aaKnown RBP13□□□□□ -0.33
PRAME-204ENST00000403441 GNSP15586 552 aa13□□□□□ -0.33
PRAME-204ENST00000403441 ADORA2BP29275 332 aa13□□□□□ -0.33
PRAME-204ENST00000403441 PIK3CAP42336 1068 aa13□□□□□ -0.33
PRAME-204ENST00000403441 DGKGP49619 791 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms