RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 DENND1AQ8TEH3 1009 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 NT5C3BQ969T7 300 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 OSBPL7Q9BZF2 842 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 TRABDQ9H4I3 376 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 DHX35Q9H5Z1 703 aaKnown RBP16.35■□□□□ 0.21
CDC42-203ENST00000400259 FAM105AQ9NUU6 356 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 HEY1Q9Y5J3 304 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 USP3Q9Y6I4 520 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 TEX264Q9Y6I9 313 aa16.35■□□□□ 0.21
CDC42-203ENST00000400259 TCP11X1B4DZS4 312 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 SPAG6O75602 509 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 RBL1P28749 1068 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 STX2P32856 288 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 NBPF20Q3BBV1 942 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 GNASQ5JWF2 1037 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 WSCD1Q658N2 575 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 CAPN12Q6ZSI9 719 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 CCT6BQ92526 530 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 KCTD15Q96SI1 283 aaPredicted RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 TSPYL2Q9H2G4 693 aaPredicted RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 KDM4CQ9H3R0 1056 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 ACTR5Q9H9F9 607 aaPredicted RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 NMRK2Q9NPI5 230 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 ST3GAL5Q9UNP4 418 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 SNX3O60493 162 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 ATP2C2O75185 946 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 ATXN1P54253 815 aaKnown RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 MRPS5P82675 430 aaKnown RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 ADIGQ0VDE8 80 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 SLC45A4Q5BKX6 768 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 GDF6Q6KF10 455 aaPredicted RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 SERINC5Q86VE9 423 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 PALM2Q8IXS6 379 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 TMEM86AQ8N2M4 240 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 TAB3Q8N5C8 712 aaPredicted RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 CCDC185Q8N715 623 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 CSPG4P5Q96PW8 444 aa16.34■□□□□ 0.21
CDC42-203ENST00000400259 ELAC2Q9BQ52 826 aaKnown RBP16.34■□□□□ 0.21
CDC42-203ENST00000400259 GCATO75600 419 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 ASMTLO95671 621 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 GHRP10912 638 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 KRT15P19012 456 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 WDR4P57081 412 aaKnown RBP16.33■□□□□ 0.2
CDC42-203ENST00000400259 ACTN3Q08043 901 aaPredicted RBP16.33■□□□□ 0.2
CDC42-203ENST00000400259 MGAT3Q09327 533 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 DEFB106AQ8N104 65 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 SMC6Q96SB8 1091 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 KLC2Q9H0B6 622 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 RAB6BQ9NRW1 208 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 ETNK2Q9NVF9 386 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 FZD10Q9ULW2 581 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 CAPN7Q9Y6W3 813 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
CDC42-203ENST00000400259 FAM155AB1AL88 458 aaPredicted RBP16.33■□□□□ 0.2
CDC42-203ENST00000400259 NOS2P35228 1153 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 ELK3P41970 407 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 IL9RQ01113 521 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 SREBF2Q12772 1141 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 OTUD1Q5VV17 481 aaPredicted RBP16.33■□□□□ 0.2
CDC42-203ENST00000400259 CLEC20AQ6ZU45 233 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 MCUQ8NE86 351 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 MZB1Q8WU39 189 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 SENP8Q96LD8 212 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 QKIQ96PU8 341 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■■□□ 17.4
CDC42-203ENST00000400259 SLC2A13Q96QE2 648 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 TGS1Q96RS0 853 aaKnown RBP16.33■□□□□ 0.2
CDC42-203ENST00000400259 NPY6RQ99463 290 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 PAFAH2Q99487 392 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 PNPLA8Q9NP80 782 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 GIT1Q9Y2X7 761 aa16.33■□□□□ 0.2
CDC42-203ENST00000400259 CCT8L1PA6NM43 557 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 MEIS3P2A8K0S8 358 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 TYROBPO43914 113 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 BEST1O76090 585 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 CHRNA1P02708 482 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 THP07101 528 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 MLH1P40692 756 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 LHX1P48742 406 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 YWHAZP63104 245 aaKnown RBP16.32■□□□□ 0.2
CDC42-203ENST00000400259 SLC10A2Q12908 348 aaPredicted RBP16.32■□□□□ 0.2
CDC42-203ENST00000400259 KIAA0319Q5VV43 1072 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 NCBP2-AS2Q69YL0 99 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 CXCL17Q6UXB2 119 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 RGS9BPQ6ZS82 235 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 MRPL10Q7Z7H8 261 aaKnown RBP16.32■□□□□ 0.2
CDC42-203ENST00000400259 TAX1BP1Q86VP1 789 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 IGDCC3Q8IVU1 814 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 GDAP1Q8TB36 358 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 DCAKDQ8WVC6 231 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 WNT8BQ93098 351 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 MLXIPLQ9NP71 852 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 FGFR1OP2Q9NVK5 253 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 CHMP2BQ9UQN3 213 aa16.32■□□□□ 0.2
CDC42-203ENST00000400259 CLDN5O00501 218 aa16.31■□□□□ 0.2
CDC42-203ENST00000400259 ACAT1P24752 427 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms