RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 IRF1P10914 325 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 GAP43P17677 238 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 LONP1P36776 959 aaKnown RBP19.1■□□□□ 0.65
UFD1-202ENST00000399523 EIF2S3P41091 472 aaKnown RBP19.1■□□□□ 0.65
UFD1-202ENST00000399523 DGKGP49619 791 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 ENPP2Q13822 863 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 TMPRSS12Q86WS5 348 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 GPD1LQ8N335 351 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 OR6B3Q8NGW1 331 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 KCNK16Q96T55 309 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 TRIM9Q9C026 710 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 DPEP3Q9H4B8 488 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 TBC1D7Q9P0N9 293 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 FBXO10Q9UK96 956 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 PCDHB13Q9Y5F0 798 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 NPC1O15118 1278 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 PCDHGA12O60330 932 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 GRK6P43250 576 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 CSNK1EP49674 416 aaKnown RBP19.09■□□□□ 0.65
UFD1-202ENST00000399523 AFF3P51826 1226 aaKnown RBP19.09■□□□□ 0.65
UFD1-202ENST00000399523 CASP5P51878 434 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 GRIN1Q05586 938 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 KIF19Q2TAC6 998 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 DHRS13Q6UX07 377 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 TPGS1Q6ZTW0 290 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 SYCP3Q8IZU3 236 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 B3GALNT2Q8NCR0 500 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 NUP58Q9BVL2 599 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 KLF16Q9BXK1 252 aaPredicted RBP19.09■□□□□ 0.65
UFD1-202ENST00000399523 PCED1AQ9H1Q7 454 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 OLFML3Q9NRN5 406 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 COMMD8Q9NX08 183 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 GMIPQ9P107 970 aa19.09■□□□□ 0.65
UFD1-202ENST00000399523 CKAP5Q14008 2032 aa19.08■□□□□ 0.65
UFD1-202ENST00000399523 PLK4O00444 970 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 KIAA0391O15091 583 aaKnown RBP19.08■□□□□ 0.64
UFD1-202ENST00000399523 GCNT3O95395 438 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 SLC5A3P53794 718 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 SURF1Q15526 300 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 TMPRSS6Q8IU80 811 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 NOC3LQ8WTT2 800 aaKnown RBP19.08■□□□□ 0.64
UFD1-202ENST00000399523 DNAJC19Q96DA6 116 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 NXPE2Q96DL1 559 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 SIPA1Q96FS4 1042 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 NACA2Q9H009 215 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 SLC27A6Q9Y2P4 619 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 SNX11Q9Y5W9 270 aa19.08■□□□□ 0.64
UFD1-202ENST00000399523 MUC22E2RYF6 1773 aaPredicted RBP19.08■□□□□ 0.64
UFD1-202ENST00000399523 TLR5O60602 858 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 CST3P01034 146 aaPredicted RBP19.07■□□□□ 0.64
UFD1-202ENST00000399523 ACO1P21399 889 aaKnown RBP19.07■□□□□ 0.64
UFD1-202ENST00000399523 PGFP49763 221 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 ALCAMQ13740 583 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 TRAPPC11Q7Z392 1133 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 WDR49Q8IV35 697 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 ENGASEQ8NFI3 743 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 OSGEPQ9NPF4 335 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.07■□□□□ 0.644e-7■■■■■ 46.9
UFD1-202ENST00000399523 THAP10Q9P2Z0 257 aaPredicted RBP19.07■□□□□ 0.64
UFD1-202ENST00000399523 SLCO1B1Q9Y6L6 691 aa19.07■□□□□ 0.64
UFD1-202ENST00000399523 ZNF233A6NK53 670 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 TLX3O43711 291 aaPredicted RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 PRPF6O94906 941 aaKnown RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 IL12RB1P42701 662 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 LRRC69Q6ZNQ3 347 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 PAQR9Q6ZVX9 377 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 CBWD2Q8IUF1 395 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 PRCCQ92733 491 aaPredicted RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 IGSF8Q969P0 613 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 FCRL3Q96P31 734 aaPredicted RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 FGFBP2Q9BYJ0 223 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 DMAP1Q9NPF5 467 aaPredicted RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 STK17AQ9UEE5 414 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 LSM7Q9UK45 103 aaKnown RBP19.06■□□□□ 0.64
UFD1-202ENST00000399523 ANKRD6Q9Y2G4 727 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 KIF3AQ9Y496 699 aa19.06■□□□□ 0.64
UFD1-202ENST00000399523 A8MXQ7 604 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 J3QKU1 62 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 CAPN9O14815 690 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 PAPSS1O43252 624 aaPredicted RBP19.05■□□□□ 0.64
UFD1-202ENST00000399523 TBX18O95935 607 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 BMP15O95972 392 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 CCT8P50990 548 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 COPAP53621 1224 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
UFD1-202ENST00000399523 TEAD4Q15561 434 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 WDR72Q3MJ13 1102 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 CCDC157Q569K6 752 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 FAM35AQ86V20 835 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 P2RY11Q96G91 374 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 PCDHGA1Q9Y5H4 931 aa19.05■□□□□ 0.64
UFD1-202ENST00000399523 ATP8B3O60423 1300 aa19.04■□□□□ 0.64
UFD1-202ENST00000399523 TEX51A0A1B0GUA7 166 aa19.04■□□□□ 0.64
UFD1-202ENST00000399523 CAPN8A6NHC0 703 aa19.04■□□□□ 0.64
UFD1-202ENST00000399523 RRP8O43159 456 aaKnown RBP19.04■□□□□ 0.64
UFD1-202ENST00000399523 SYNCRIPO60506 623 aaKnown RBP19.04■□□□□ 0.64
UFD1-202ENST00000399523 GRIA4P48058 902 aa19.04■□□□□ 0.64
UFD1-202ENST00000399523 TNNC1P63316 161 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms