RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 EDF1O60869 148 aaKnown RBP14.37□□□□□ -0.11
PRAME-202ENST00000398743 HUS1O60921 280 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 TOMM70O94826 608 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 APRTP07741 180 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 MAGEA6P43360 314 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 NR2C2P49116 596 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 CPT1AP50416 773 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 NCALDP61601 193 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 CCDC15Q0P6D6 951 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 SNCBQ16143 134 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 MORN1Q5T089 497 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 ZNF618Q5T7W0 954 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 FAXCQ5TGI0 409 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 ICE2Q659A1 982 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 ECHDC2Q86YB7 292 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 BANPQ8N9N5 519 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 SLC44A1Q8WWI5 657 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 GOLGA2P5Q9HBQ8 144 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRAME-202ENST00000398743 KAT6AQ92794 2004 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 HAS3O00219 553 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 MT-ND3P03897 115 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
PRAME-202ENST00000398743 ELF3P78545 371 aaPredicted RBP14.37□□□□□ -0.11
PRAME-202ENST00000398743 GBE1Q04446 702 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 SLC45A4Q5BKX6 768 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 UBXN11Q5T124 520 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 FAM182AQ5T1J6 154 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 STRADAQ7RTN6 431 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 LIMS2Q7Z4I7 341 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 CCDC110Q8TBZ0 833 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 TCP10LQ8TDR4 215 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 CFAP36Q96G28 342 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 ETNK1Q9HBU6 452 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 PNPLA8Q9NP80 782 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 CPA4Q9UI42 421 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 IPPQ9Y573 584 aa14.37□□□□□ -0.11
PRAME-202ENST00000398743 GOLGA8RI6L899 631 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 MGRN1O60291 552 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 CAPN15O75808 1086 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 ADRA1DP25100 572 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 CRYBB1P53674 252 aaPredicted RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 SLC8A3P57103 927 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 EFHC1Q5JVL4 640 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 CAND1Q86VP6 1230 aaKnown RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 VPS52Q8N1B4 723 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 AGGF1Q8N302 714 aaeCLIP14.36□□□□□ -0.11
PRAME-202ENST00000398743 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 ZNF75CPQ92670 426 aaPredicted RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 CSPG4P5Q96PW8 444 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 KCTD15Q96SI1 283 aaPredicted RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 MTMR10Q9NXD2 777 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 FLRT1Q9NZU1 646 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 ZC3H7BQ9UGR2 993 aaKnown RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 USH1CQ9Y6N9 552 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 XPO1O14980 1071 aaKnown RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 GCATO75600 419 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 MYL3P08590 195 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 MATKP42679 507 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 LILRA4P59901 499 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 SLC26A11Q86WA9 606 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 B3GALNT2Q8NCR0 500 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 MCUQ8NE86 351 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 LRRN4Q8WUT4 740 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 LRRC39Q96DD0 335 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 QKIQ96PU8 341 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRAME-202ENST00000398743 KLF6Q99612 283 aaPredicted RBP14.36□□□□□ -0.11
PRAME-202ENST00000398743 KATNAL1Q9BW62 490 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 POPDC2Q9HBU9 364 aa14.36□□□□□ -0.11
PRAME-202ENST00000398743 TRIP11Q15643 1979 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 C17orf102A2RUQ5 167 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 HGSO14964 777 aaPredicted RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 LPXNO60711 386 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 CELF2O95319 508 aaKnown RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 ALADP13716 330 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 TKTP29401 623 aaKnown RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 FAAP100Q0VG06 881 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 SLC10A2Q12908 348 aaPredicted RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 SETDB1Q15047 1291 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 HEATR6Q6AI08 1181 aaKnown RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 FAM149B1Q96BN6 582 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 THOC1Q96FV9 657 aaKnown RBP14.35□□□□□ -0.11
PRAME-202ENST00000398743 VPS11Q9H270 941 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 TTLL3Q9Y4R7 772 aa14.35□□□□□ -0.11
PRAME-202ENST00000398743 CHUKO15111 745 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 METTL18O95568 372 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 NQO1P15559 274 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 ARL4AP40617 200 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 SKIV2L2P42285 1042 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 ADIGQ0VDE8 80 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms