RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ZCWPW1Q9H0M4 648 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 TP63Q9H3D4 680 aaPredicted RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 TRIM36Q9NQ86 728 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 HELLSQ9NRZ9 838 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 RXFP3Q9NSD7 469 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 KCTD5Q9NXV2 234 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 TMOD4Q9NZQ9 345 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 DNAJB11Q9UBS4 358 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ZNF69Q9UC07 566 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ADAM21Q9UKJ8 722 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 HPSEQ9Y251 543 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 MRPS17Q9Y2R5 130 aaKnown RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 ZNF521Q96K83 1311 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 WDR27A2RRH5 827 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 AQP12BA6NM10 295 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 F5H697 171 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 PCDH17O14917 1159 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 PEX1O43933 1283 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 COQ9O75208 318 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 FAM155BO75949 473 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 RHOP08100 348 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 CHRM2P08172 466 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 PECAM1P16284 738 aaPredicted RBP3.22□□□□□ -1.89
CD47-203ENST00000398258 UQCRC1P31930 480 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 CDK7P50613 346 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 PDE6CP51160 858 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 HNRNPMP52272 730 aaKnown RBP eCLIP3.22□□□□□ -1.89
CD47-203ENST00000398258 PNLIPRP1P54315 467 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 TFF2Q03403 129 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 POU5F1BQ06416 359 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 KCNAB1Q14722 419 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 PTCHD3Q3KNS1 767 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 AKNAD1Q5T1N1 836 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 VPS53Q5VIR6 699 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 KIAA0895LQ68EN5 471 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 ABLIM2Q6H8Q1 611 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 RGS7BPQ6MZT1 257 aaPredicted RBP3.22□□□□□ -1.89
CD47-203ENST00000398258 JMJD6Q6NYC1 403 aaPredicted RBP3.22□□□□□ -1.89
CD47-203ENST00000398258 SLC15A3Q8IY34 581 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 ABRAQ8N0Z2 381 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 GALNT15Q8N3T1 639 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 ATG16L2Q8NAA4 619 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 B3GALNT2Q8NCR0 500 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 SPPL3Q8TCT6 385 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 HASPINQ8TF76 798 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 STYXQ8WUJ0 223 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 TFAP2BQ92481 460 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 FAM136AQ96C01 138 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 GCC1Q96CN9 775 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 FBXL20Q96IG2 436 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 TIMP4Q99727 224 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 TPSD1Q9BZJ3 242 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 SLC25A32Q9H2D1 315 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 GBA2Q9HCG7 927 aaPredicted RBP3.22□□□□□ -1.89
CD47-203ENST00000398258 SAGE1Q9NXZ1 904 aa3.22□□□□□ -1.89
CD47-203ENST00000398258 CCDC187A0A096LP49 1063 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PRR23D1E9PI22 279 aaPredicted RBP3.21□□□□□ -1.9
CD47-203ENST00000398258 M0R3H8 397 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 IPO5O00410 1097 aaKnown RBP3.21□□□□□ -1.9
CD47-203ENST00000398258 PIP5K1BO14986 540 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 SRGAP2O75044 1071 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 RASAL1O95294 804 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PDHA1P08559 390 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PRR35P0CG20 571 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PRR23D2P0DMB1 279 aaPredicted RBP3.21□□□□□ -1.9
CD47-203ENST00000398258 PAX3P23760 479 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 CST5P28325 142 aaPredicted RBP3.21□□□□□ -1.9
CD47-203ENST00000398258 EPHA3P29320 983 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 HTR7P34969 479 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PTGER1P34995 402 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 TIRAPP58753 221 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ITIH3Q06033 890 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 GRM1Q13255 1194 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 POSTNQ15063 836 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ARHGAP15Q53QZ3 475 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ARHGAP40Q5TG30 622 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 CACHD1Q5VU97 1274 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 AWAT2Q6E213 333 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 GGT6Q6P531 493 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 VWA1Q6PCB0 445 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 CYP26C1Q6V0L0 522 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 RFX8Q6ZV50 586 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PTF1AQ7RTS3 328 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ZNF354CQ86Y25 554 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 GATAD2AQ86YP4 633 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ANKRD18AQ8IVF6 992 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 SPARTQ8N0X7 666 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 IL17REQ8NFR9 667 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 OR1N1Q8NGS0 311 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 SUN3Q8TAQ9 357 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 DNAJB14Q8TBM8 379 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ATG4AQ8WYN0 398 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 SDCCAG3Q96C92 435 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 LTV1Q96GA3 475 aaPredicted RBP3.21□□□□□ -1.9
CD47-203ENST00000398258 TBATAQ96M53 351 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 VN1R3Q9BXE9 311 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 ACTRT3Q9BYD9 372 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 TWSG1Q9GZX9 223 aa3.21□□□□□ -1.9
CD47-203ENST00000398258 PABPC3Q9H361 631 aaKnown RBP3.21□□□□□ -1.9
CD47-203ENST00000398258 CPNE5Q9HCH3 593 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms