RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CAPN6Q9Y6Q1 641 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 LAMA2P24043 3122 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 GRID2IPA4D2P6 1211 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 GLTPD2A6NH11 291 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 E7EVH7 732 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 M0R3H8 397 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 PJA2O43164 708 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TLR2O60603 784 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 PRLP01236 227 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 FCER1AP12319 257 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 L1CAMP32004 1257 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TTKP33981 857 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 POU3F4P49335 361 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 AFF1P51825 1210 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 RPS8P62241 208 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 DMC1Q14565 340 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 KCNT1Q5JUK3 1230 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 MIIPQ5JXC2 388 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF574Q6ZN55 896 aaPredicted RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TTC13Q8NBP0 860 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TEX47Q8TBZ9 253 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TRPM4Q8TD43 1214 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 ZMYND12Q9H0C1 365 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 ARHGAP20Q9P2F6 1191 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SNX6Q9UNH7 406 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 MYH10P35580 1976 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 OTOFQ9HC10 1997 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 PNMA6FA0A0J9YX94 578 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 LRRC53A6NM62 1247 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 DCDC2CA8MYV0 355 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 K7EPI3 171 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 AGPSO00116 658 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 ATP9AO75110 1047 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC34A2O95436 690 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 RARBP10826 455 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 IFNA8P32881 189 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TXKP42681 527 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 KCNAB2Q13303 367 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC9A5Q14940 896 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 CALCRLQ16602 461 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 UGP2Q16851 508 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 C12orf60Q5U649 245 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 RFPL4BQ6ZWI9 263 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 PIK3C3Q8NEB9 887 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 GTF3C2Q8WUA4 911 aaPredicted RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SH3GL2Q99962 352 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 VPS45Q9NRW7 570 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 JAG2Q9Y219 1238 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 RANBP2P49792 3224 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 HEATR9A2RTY3 570 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT87PA6NCN2 255 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TSPAN3O60637 253 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 KERAO60938 352 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 HEXIM1O94992 359 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 CRYZL1O95825 349 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 CHRNA1P02708 482 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SERPING1P05155 500 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SNRPAP09012 282 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 USP17L8P0C7I0 530 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 VEGFAP15692 232 aaPredicted RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 CXCR5P32302 372 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 VWA5B1Q5TIE3 1220 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 HAUS3Q68CZ6 603 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 USP50Q70EL3 339 aaPredicted RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 TPH2Q8IWU9 490 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 CDH26Q8IXH8 852 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 SYN2Q92777 582 aaPredicted RBP6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 MAD2L2Q9UI95 211 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 RWDD3Q9Y3V2 267 aa6.83□□□□□ -1.32
TM9SF4-202ENST00000398022 POLR2AP24928 1970 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 TRAF5O00463 557 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 FRS3O43559 492 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 CYP1A1P04798 512 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PLEKP08567 350 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 RARGP13631 454 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 ACSL1P33121 698 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 FKBP3Q00688 224 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 LEXMQ3ZCV2 418 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 RTP2Q5QGT7 225 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 VARS2Q5ST30 1063 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PGM2L1Q6PCE3 622 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 THNSL2Q86YJ6 484 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 NATD1Q8N6N6 113 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PLPP7Q8NBV4 271 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 MTMR8Q96EF0 704 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 CCDC43Q96MW1 224 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 YIPF4Q9BSR8 244 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 MLPHQ9BV36 600 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 MRPL1Q9BYD6 325 aaKnown RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 GHITMQ9H3K2 345 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 MBD1Q9UIS9 605 aaPredicted RBP6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 GGA2Q9UJY4 613 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 BCS1LQ9Y276 419 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 STK38LQ9Y2H1 464 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 SIK3Q9Y2K2 1263 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 M0R2N6 131 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 BUB1O43683 1085 aa6.82□□□□□ -1.32
TM9SF4-202ENST00000398022 PIAS2O75928 621 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms