RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 TTYH3Q9C0H2 523 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 MTMR12Q9C0I1 747 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 NUCKS1Q9H1E3 243 aaKnown RBP7.32□□□□□ -1.24
SUMO3-202ENST00000397893 EBF3Q9H4W6 596 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 SEMA4GQ9NTN9 838 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 TDP1Q9NUW8 608 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 POLR3BQ9NW08 1133 aaPredicted RBP7.32□□□□□ -1.24
SUMO3-202ENST00000397893 THG1LQ9NWX6 298 aaKnown RBP7.32□□□□□ -1.24
SUMO3-202ENST00000397893 USP18Q9UMW8 372 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 PCDHA13Q9Y5I0 950 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 SNX9Q9Y5X1 595 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.32□□□□□ -1.24
SUMO3-202ENST00000397893 TICRRQ7Z2Z1 1910 aa7.32□□□□□ -1.24
SUMO3-202ENST00000397893 DCDC2BA2VCK2 349 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 ANTXRLA6NF34 631 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 TM4SF5O14894 197 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 KIAA0391O15091 583 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 HUS1O60921 280 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CLSTN1O94985 981 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CST3P01034 146 aaPredicted RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 FAM163BP0C2L3 166 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 SDHBP21912 280 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 WARSP23381 471 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 GJA4P35212 333 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 AVPR1AP37288 418 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 GGCXP38435 758 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 MAGEA1P43355 309 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 RAP1GAPP47736 663 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 LHX1P48742 406 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 NAP1L1P55209 391 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CORO7P57737 925 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 USP46P62068 366 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 RPL10AP62906 217 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 MYL7Q01449 175 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 LRRC63Q05C16 580 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 USP4Q13107 963 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 NNTQ13423 1086 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CSRP2Q16527 193 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 EML3Q32P44 896 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 GLE1Q53GS7 698 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 ALS2CLQ60I27 953 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 ANKRD40Q6AI12 368 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 C8orf74Q6P047 294 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 EMBQ6PCB8 327 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CACNA2D4Q7Z3S7 1137 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 GSPT2Q8IYD1 628 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 ADGRF2Q8IZF7 708 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 SYCP3Q8IZU3 236 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 AENQ8WTP8 325 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 ZNF516Q92618 1163 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 MRPS31Q92665 395 aaKnown RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 HPDLQ96IR7 371 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 SPATA17Q96L03 361 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CEP295NLQ96MC4 621 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 NOX5Q96PH1 765 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 SYT15Q9BQS2 421 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 TTLL2Q9BWV7 592 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 CAPS2Q9BXY5 557 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 LINC00597Q9H2U6 94 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 TMEM206Q9H813 350 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 MMRN2Q9H8L6 949 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 ECT2Q9H8V3 914 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 AGPAT3Q9NRZ7 376 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 TMEM30AQ9NV96 361 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 HSPBP1Q9NZL4 362 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 RNF14Q9UBS8 474 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 LCMT1Q9UIC8 334 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 GMEB2Q9UKD1 530 aa7.31□□□□□ -1.24
SUMO3-202ENST00000397893 KIF26AQ9ULI4 1882 aaPredicted RBP7.31□□□□□ -1.24
SUMO3-202ENST00000397893 A0A087WUV0 522 aaPredicted RBP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 PVALEFA0A1B0GWK0 134 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 C2orf78A6NCI8 922 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 ZNF233A6NK53 670 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 EBAG9O00559 213 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 ZNF185O15231 689 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 EIF3DO15371 548 aaKnown RBP eCLIP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 GDF9O60383 454 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 SHOX2O60902 331 aaPredicted RBP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 MOCS3O95396 460 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 OLFM2O95897 454 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 TNFRSF8P28908 595 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 PCSK1P29120 753 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 HNRNPH3P31942 346 aaKnown RBP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 EIF4A3P38919 411 aaKnown RBP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 PXNP49023 591 aaPredicted RBP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 KLK7P49862 253 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 CACNA2D1P54289 1103 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 PSMC1P62191 440 aaKnown RBP7.3□□□□□ -1.24
SUMO3-202ENST00000397893 GNGT1P63211 74 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 CYP27A1Q02318 531 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 PSMD2Q13200 908 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 SURF1Q15526 300 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 TAF12Q16514 161 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 DUOXA2Q1HG44 320 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 BMT2Q1RMZ1 405 aa7.3□□□□□ -1.24
SUMO3-202ENST00000397893 CCDC40Q4G0X9 1142 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms