RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 BPHLQ86WA6 291 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-208ENST00000397204 C12orf40Q86WS4 652 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 TMEM25Q86YD3 366 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 ETFBKMTQ8IXQ9 262 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 HDDC3Q8N4P3 179 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 PDILTQ8N807 584 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 ZNF513Q8N8E2 541 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-208ENST00000397204 NAT16Q8N8M0 369 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 XXYLT1Q8NBI6 393 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 GLIS3Q8NEA6 775 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 FBXO32Q969P5 355 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 SYAP1Q96A49 352 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-208ENST00000397204 CCDC127Q96BQ5 260 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 TNIP3Q96KP6 325 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 KCNK16Q96T55 309 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 CGRRF1Q99675 332 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 TRIM9Q9C026 710 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 XYLT2Q9H1B5 865 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 DPEP3Q9H4B8 488 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-208ENST00000397204 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 AGPAT3Q9NRZ7 376 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 DACH1Q9UI36 760 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 RALYQ9UKM9 306 aaKnown RBP9.28□□□□□ -0.92
CAPN3-208ENST00000397204 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 SH3BP1Q9Y3L3 701 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 NME7Q9Y5B8 376 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 THADAQ6YHU6 1953 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 ATP8B3O60423 1300 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 PI4KAP42356 2102 aa9.28□□□□□ -0.92
CAPN3-208ENST00000397204 NUP205Q92621 2012 aa9.27□□□□□ -0.92
CAPN3-208ENST00000397204 MYO18AQ92614 2054 aaKnown RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 ITPR1Q14643 2758 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 SRRM3A6NNA2 597 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 CLDN5O00501 218 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 CLIC2O15247 247 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 PHACTR2O75167 634 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 TOP3BO95985 862 aaKnown RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 CFIP05156 583 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 SYPP08247 313 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 MYL6P60660 151 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 SIM1P81133 766 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 RPL6Q02878 288 aaKnown RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 KDSRQ06136 332 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 ZNF33AQ06730 810 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 SLC14A1Q13336 389 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 FAM26FQ5R3K3 315 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 PAQR9Q6ZVX9 377 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 ARMCX6Q7L4S7 300 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 IQUBQ8NA54 791 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 SCAMP5Q8TAC9 235 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 HPS3Q969F9 1004 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 USP28Q96RU2 1077 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 FAM124BQ9H5Z6 455 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 CAPN10Q9HC96 672 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 DMAP1Q9NPF5 467 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 WDR35Q9P2L0 1181 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 NXF1Q9UBU9 619 aaKnown RBP9.27□□□□□ -0.93
CAPN3-208ENST00000397204 LAMA5O15230 3695 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 ANAPC1Q9H1A4 1944 aa9.27□□□□□ -0.93
CAPN3-208ENST00000397204 KNL1Q8NG31 2342 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 A0A1W2PQD8 194 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 HYAL3O43820 417 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-208ENST00000397204 OPHN1O60890 802 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 PPP6R2O75170 966 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 GABRG2P18507 467 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 CYP2J2P51589 502 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 SLC5A3P53794 718 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 CDH8P55286 799 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 ASIC1P78348 528 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 CLDN10P78369 228 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-208ENST00000397204 ARID5BQ14865 1188 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 ZNF423Q2M1K9 1284 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 ANO4Q32M45 955 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 C10orf76Q5T2E6 689 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 GRAMD4Q6IC98 578 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 BBS7Q8IWZ6 715 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 C12orf56Q8IXR9 622 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 TERB1Q8NA31 727 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 LINC00301Q8NCQ3 95 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 SCFD1Q8WVM8 642 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 SMARCD1Q96GM5 515 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 ZNF419Q96HQ0 510 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-208ENST00000397204 INTS4Q96HW7 963 aaKnown RBP9.26□□□□□ -0.93
CAPN3-208ENST00000397204 XPO6Q96QU8 1125 aaKnown RBP9.26□□□□□ -0.93
CAPN3-208ENST00000397204 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 MED10Q9BTT4 135 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 NACA2Q9H009 215 aa9.26□□□□□ -0.93
CAPN3-208ENST00000397204 GZF1Q9H116 711 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-208ENST00000397204 FBXO44Q9H4M3 255 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms