RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 CDK5RAP1Q96SZ6 601 aaKnown RBP12.72□□□□□ -0.37
GAPDH-202ENST00000396856 SCNM1Q9BWG6 230 aa12.72□□□□□ -0.37
GAPDH-202ENST00000396856 METTL14Q9HCE5 456 aaKnown RBP12.72□□□□□ -0.37
GAPDH-202ENST00000396856 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
GAPDH-202ENST00000396856 SPHK2Q9NRA0 654 aa12.72□□□□□ -0.37
GAPDH-202ENST00000396856 ARMCX3Q9UH62 379 aaPredicted RBP12.72□□□□□ -0.37
GAPDH-202ENST00000396856 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
GAPDH-202ENST00000396856 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
GAPDH-202ENST00000396856 MMP17Q9ULZ9 603 aa12.72□□□□□ -0.37
GAPDH-202ENST00000396856 PCDHGA5Q9Y5G8 931 aa12.72□□□□□ -0.37
GAPDH-202ENST00000396856 CYP26A1O43174 497 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 IRF1P10914 325 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 NOVA1P51513 510 aaKnown RBP12.71□□□□□ -0.37
GAPDH-202ENST00000396856 DGKEP52429 567 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 SEC13P55735 322 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 FOXC1Q12948 553 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 ELF2Q15723 593 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 SOWAHCQ53LP3 525 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-202ENST00000396856 C2orf27AQ580R0 203 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 ARHGAP17Q68EM7 881 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 TCEAL6Q6IPX3 200 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 C11orf74Q86VG3 221 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 BBS7Q8IWZ6 715 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 ETFBKMTQ8IXQ9 262 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 TCEAL3Q969E4 200 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 CEP63Q96MT8 703 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 KLF16Q9BXK1 252 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-202ENST00000396856 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
GAPDH-202ENST00000396856 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 SPAG17Q6Q759 2223 aa12.71□□□□□ -0.37
GAPDH-202ENST00000396856 BPTFQ12830 3046 aa12.71□□□□□ -0.38
GAPDH-202ENST00000396856 A0A1W2PQH9 124 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 ALDH1A2O94788 518 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 RHOBTB1O94844 696 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 TBX18O95935 607 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 RALAP11233 206 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 RARGP13631 454 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 TBXAS1P24557 533 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 PLA2G4AP47712 749 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 SLC6A11P48066 632 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 PGFP49763 221 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 PMS1P54277 932 aaKnown RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 RAD23BP54727 409 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 ZNF252P-AS1Q0IIN9 211 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 CUL2Q13617 745 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 CRY1Q16526 586 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 ANO4Q32M45 955 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 USP39Q53GS9 565 aaKnown RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 EOGTQ5NDL2 527 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 RNF43Q68DV7 783 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 FOXR2Q6PJQ5 311 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 TRMT11Q7Z4G4 463 aaKnown RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 RASSF3Q86WH2 238 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 C12orf40Q86WS4 652 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 SLC4A11Q8NBS3 891 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 CNOT6LQ96LI5 555 aaKnown RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 ARID3AQ99856 593 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 VPS45Q9NRW7 570 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 POLR3BQ9NW08 1133 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-202ENST00000396856 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 DEC1Q9P2X7 70 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 NAGPAQ9UK23 515 aa12.7□□□□□ -0.38
GAPDH-202ENST00000396856 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 TBC1D3BA6NDS4 549 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 GREM1O60565 184 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 TULP3O75386 442 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 CEACAM1P13688 526 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 MPLP40238 635 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 KIR2DL1P43626 348 aaPredicted RBP12.69□□□□□ -0.38
GAPDH-202ENST00000396856 BCAT1P54687 386 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 COG7P83436 770 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 KDSRQ06136 332 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 CETN1Q12798 172 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 PLK5Q496M5 336 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 SH3PXD2AQ5TCZ1 1133 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 TMEM25Q86YD3 366 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 PHTF2Q8N3S3 785 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 CCDC33Q8N5R6 958 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 ALLCQ8N6M5 410 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 ANKRD52Q8NB46 1076 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 TATDN2Q93075 761 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 XPO6Q96QU8 1125 aaKnown RBP12.69□□□□□ -0.38
GAPDH-202ENST00000396856 NMUR1Q9HB89 426 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
GAPDH-202ENST00000396856 MARK1Q9P0L2 795 aa12.69□□□□□ -0.38
GAPDH-202ENST00000396856 WDR35Q9P2L0 1181 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms