RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 USP33Q8TEY7 942 aa12.35□□□□□ -0.43
ATN1-202ENST00000396684 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
ATN1-202ENST00000396684 SHOC2Q9UQ13 582 aa12.35□□□□□ -0.43
ATN1-202ENST00000396684 KIF13BQ9NQT8 1826 aa12.35□□□□□ -0.43
ATN1-202ENST00000396684 THOC5Q13769 683 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 ZKSCAN8Q15776 578 aaPredicted RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 C3orf62Q6ZUJ4 267 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 ZNF296Q8WUU4 475 aaPredicted RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 RNF157Q96PX1 679 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 GDAP2Q9NXN4 497 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 HGSO14964 777 aaPredicted RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 AMHP03971 560 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 ANO4Q32M45 955 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 TSEN2Q8NCE0 465 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 GDAP1Q8TB36 358 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 CYLDQ9NQC7 956 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 CACNG4Q9UBN1 327 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 DRG1Q9Y295 367 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 A0A1W2PQ45 241 aaPredicted RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 A0A1W2PQY0 241 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 H3BQF6 201 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 HAS3O00219 553 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 TRIM66O15016 1216 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 DAB1O75553 588 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 TROVE2P10155 538 aaKnown RBP eCLIP12.34□□□□□ -0.43
ATN1-202ENST00000396684 YWHAQP27348 245 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 CNTN6Q9UQ52 1028 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 C3orf70A6NLC5 250 aaPredicted RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 NR2C2P49116 596 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 ANKRD20A8PQ5CZ79 823 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 ZC3H12AQ5D1E8 599 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 KATNBL1Q9H079 304 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 TLR8Q9NR97 1041 aaKnown RBP12.34□□□□□ -0.43
ATN1-202ENST00000396684 NR2E1Q9Y466 385 aa12.34□□□□□ -0.43
ATN1-202ENST00000396684 MYBPHLA2RUH7 354 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 PAPSS1O43252 624 aaPredicted RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 SPAG6O75602 509 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 ZSCAN5DPP0CG00 497 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 FGFR1P11362 822 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 CKBP12277 381 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 FDFT1P37268 417 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 TCEAL1Q15170 157 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 STRADAQ7RTN6 431 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 TTC30AQ86WT1 665 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 APBB2Q92870 758 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 ARL8AQ96BM9 186 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 PABPC5Q96DU9 382 aaKnown RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 ACBD6Q9BR61 282 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 ZNF670Q9BS34 389 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 AGO3Q9H9G7 860 aaKnown RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 PPCSQ9HAB8 311 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 XAB2Q9HCS7 855 aaKnown RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 ABCC13Q9NSE7 274 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 EFR3BQ9Y2G0 817 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 PIRO00625 290 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 ARL1P40616 181 aaPredicted RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 ZNF235Q14590 738 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 LPIN1Q14693 890 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 TRADDQ15628 312 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 SLC25A52Q3SY17 297 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 SMYD5Q6GMV2 418 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 RPRD1AQ96P16 312 aaPredicted RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 LBHD1Q9BQE6 289 aaPredicted RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 TKTL2Q9H0I9 626 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 SENP1Q9P0U3 644 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 R3HDM2Q9Y2K5 976 aaKnown RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 SLC12A8A0AV02 714 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 TTC4O95801 387 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 DNAJB2P25686 324 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 RYBPQ8N488 228 aaPredicted RBP12.33□□□□□ -0.44
ATN1-202ENST00000396684 LPIN3Q9BQK8 851 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 C10orf88Q9H8K7 445 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 KLHL14Q9P2G3 628 aa12.33□□□□□ -0.44
ATN1-202ENST00000396684 NCAM2O15394 837 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 ATP9BO43861 1147 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 VEGFBP49765 207 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 GUCY1A3Q02108 690 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 SPARCL1Q14515 664 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 TAF5Q15542 800 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 KCNT2Q6UVM3 1135 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 DENND5BQ6ZUT9 1274 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
ATN1-202ENST00000396684 CCDC68Q9H2F9 335 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms