RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 STRIP2Q9ULQ0 834 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 CAPN9O14815 690 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ZNF263O14978 683 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 DCXO43602 365 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 NCAM1P13591 858 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 GPC5P78333 572 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ZXDAP98168 799 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ARID5BQ14865 1188 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 MTF1Q14872 753 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 TAF5Q15542 800 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ARHGAP29Q52LW3 1261 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ACAD10Q6JQN1 1059 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 CC2D1AQ6P1N0 951 aaPredicted RBP20.08■□□□□ 0.81
HOXA9-202ENST00000396345 BEND5Q7L4P6 421 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 VPS36Q86VN1 386 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 PHF13Q86YI8 300 aaPredicted RBP20.08■□□□□ 0.81
HOXA9-202ENST00000396345 DRC7Q8IY82 874 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 C11orf70Q9BRQ4 267 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 BRD9Q9H8M2 597 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ABHD10Q9NUJ1 306 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 ADAM22Q9P0K1 906 aa20.08■□□□□ 0.81
HOXA9-202ENST00000396345 DDX3XO00571 662 aaKnown RBP eCLIP20.07■□□□□ 0.8
HOXA9-202ENST00000396345 CHADO15335 359 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 HSF2BPO75031 334 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 GRAP2O75791 330 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 ADCY5O95622 1261 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 CALB1P05937 261 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 FYNP06241 537 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 PLEKP08567 350 aaPredicted RBP20.07■□□□□ 0.8
HOXA9-202ENST00000396345 IRF1P10914 325 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 ALADP13716 330 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 COG7P83436 770 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 PPP1R2P3Q6NXS1 205 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 MSANTD2Q6P1R3 559 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 SLC26A9Q7LBE3 791 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 IRF7Q92985 503 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.07■□□□□ 0.8
HOXA9-202ENST00000396345 SLC2A4RGQ9NR83 387 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 NAALADL1Q9UQQ1 740 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 SH3BP1Q9Y3L3 701 aa20.07■□□□□ 0.8
HOXA9-202ENST00000396345 SLC12A8A0AV02 714 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 TMCO5BA8MYB1 307 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 GOLGA8SH3BPF8 625 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 GZMAP12544 262 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 SCNN1AP37088 669 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 C1QBPQ07021 282 aaKnown RBP20.06■□□□□ 0.8
HOXA9-202ENST00000396345 PTP4A2Q12974 167 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 FAM102AQ5T9C2 384 aaPredicted RBP20.06■□□□□ 0.8
HOXA9-202ENST00000396345 WDR59Q6PJI9 974 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 ZFYVE19Q96K21 471 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 TAS2R14Q9NYV8 317 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 ARHGAP20Q9P2F6 1191 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 SFMBT1Q9UHJ3 866 aa20.06■□□□□ 0.8
HOXA9-202ENST00000396345 KIF26AQ9ULI4 1882 aaPredicted RBP20.05■□□□□ 0.8
HOXA9-202ENST00000396345 E2F8A0AVK6 867 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 DAB1O75553 588 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 HMBSP08397 361 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 RNASE9P60153 205 aaKnown RBP20.05■□□□□ 0.8
HOXA9-202ENST00000396345 PFKPQ01813 784 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 DCAF6Q58WW2 860 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 SYPL2Q5VXT5 272 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 MON1BQ7L1V2 547 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 PHLDB2Q86SQ0 1253 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 DEFB106AQ8N104 65 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 KIAA1958Q8N8K9 716 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 DQX1Q8TE96 717 aaKnown RBP20.05■□□□□ 0.8
HOXA9-202ENST00000396345 OSCP1Q8WVF1 389 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 EDAQ92838 391 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 WBP2Q969T9 261 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 SLC2A13Q96QE2 648 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 DUS2Q9NX74 493 aaKnown RBP20.05■□□□□ 0.8
HOXA9-202ENST00000396345 WDR35Q9P2L0 1181 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 ADAMTS1Q9UHI8 967 aa20.05■□□□□ 0.8
HOXA9-202ENST00000396345 HBS1LQ9Y450 684 aaKnown RBP20.05■□□□□ 0.8
HOXA9-202ENST00000396345 PI4K2BG5E9Z4 385 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 SLC9A3R1O14745 358 aaPredicted RBP20.04■□□□□ 0.8
HOXA9-202ENST00000396345 CDC25BP30305 580 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 EIF4A3P38919 411 aaKnown RBP20.04■□□□□ 0.8
HOXA9-202ENST00000396345 IFNAR2P48551 515 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 MCOLN2Q8IZK6 566 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 TC2NQ8N9U0 490 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 DNASE1L2Q92874 299 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 ASIC4Q96FT7 647 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 FAM83CQ9BQN1 747 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 LINC00597Q9H2U6 94 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 LSM7Q9UK45 103 aaKnown RBP20.04■□□□□ 0.8
HOXA9-202ENST00000396345 FBXL21Q9UKT6 434 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 WNT6Q9Y6F9 365 aa20.04■□□□□ 0.8
HOXA9-202ENST00000396345 GOLGA6L3A6NEY3 463 aa20.03■□□□□ 0.8
HOXA9-202ENST00000396345 ARNTLO00327 626 aa20.03■□□□□ 0.8
HOXA9-202ENST00000396345 SCAMP3O14828 347 aaKnown RBP20.03■□□□□ 0.8
HOXA9-202ENST00000396345 MSI1O43347 362 aaKnown RBP20.03■□□□□ 0.8
HOXA9-202ENST00000396345 RTN2O75298 545 aa20.03■□□□□ 0.8
HOXA9-202ENST00000396345 STC2O76061 302 aa20.03■□□□□ 0.8
HOXA9-202ENST00000396345 FTLP02792 175 aaPredicted RBP20.03■□□□□ 0.8
HOXA9-202ENST00000396345 KPNA1P52294 538 aaPredicted RBP20.03■□□□□ 0.8
HOXA9-202ENST00000396345 GSCP56915 257 aaPredicted RBP20.03■□□□□ 0.8
HOXA9-202ENST00000396345 CDK17Q00537 523 aa20.03■□□□□ 0.8
HOXA9-202ENST00000396345 TRIM68Q6AZZ1 485 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms