RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 BOLA3Q53S33 107 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 TEKT4Q8WW24 435 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 RNF34Q969K3 372 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 TIFAQ96CG3 184 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 NACA2Q9H009 215 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 SMOC2Q9H3U7 446 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 TRPM5Q9NZQ8 1165 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 COX16Q9P0S2 106 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 PCSK1NQ9UHG2 260 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 OBSL1O75147 1896 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 LRRD1A4D1F6 860 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CTAGE15A4D2H0 777 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 HIDE1A8MVS5 230 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 SLU7O95391 586 aaKnown RBP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 FGF19O95750 216 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 TRUB2O95900 331 aaKnown RBP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CTAGE8P0CG41 777 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 DNAJB1P25685 340 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 MARCKSL1P49006 195 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 USP46P62068 366 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 SLC25A11Q02978 314 aaKnown RBP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 DAB2IPQ5VWQ8 1189 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 BHLHA9Q7RTU4 235 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CTAGE6Q86UF2 777 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CTAGE4Q8IX94 777 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 COG1Q8WTW3 980 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 HDAC7Q8WUI4 952 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 HSPH1Q92598 858 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CENPIQ92674 756 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 ALG3Q92685 438 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 PSMG2Q969U7 264 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 PGAP3Q96FM1 320 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CERS4Q9HA82 394 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.06■□□□□ 0.16
VAMP1-202ENST00000396308 TRIOBPQ9H2D6 2365 aa16.06■□□□□ 0.16
VAMP1-202ENST00000396308 CEP290O15078 2479 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 ZNF185O15231 689 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 SLC2A3P11169 496 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 RARGP13631 454 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 PEX5P50542 639 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 CLCN4P51793 760 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 KPNA1P52294 538 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-202ENST00000396308 HDAC4P56524 1084 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 TUBB4BP68371 445 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 ZNF211Q13398 564 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-202ENST00000396308 MTMR3Q13615 1198 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 LONRF2Q1L5Z9 754 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 SMTNL2Q2TAL5 461 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 EFHC2Q5JST6 749 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 C10orf120Q5SQS8 335 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 MSANTD2Q6P1R3 559 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 LILRA6Q6PI73 481 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 CPNE8Q86YQ8 564 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 PSTKQ8IV42 348 aaKnown RBP16.05■□□□□ 0.16
VAMP1-202ENST00000396308 DQX1Q8TE96 717 aaKnown RBP16.05■□□□□ 0.16
VAMP1-202ENST00000396308 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 NT5C3BQ969T7 300 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 MAN1C1Q9NR34 630 aa16.05■□□□□ 0.16
VAMP1-202ENST00000396308 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.05■□□□□ 0.16
VAMP1-202ENST00000396308 RIOK3O14730 519 aaKnown RBP16.04■□□□□ 0.16
VAMP1-202ENST00000396308 MDM4O15151 490 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 XYLBO75191 536 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 ENDOD1O94919 500 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 FYNP06241 537 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 SRGAP2BP0DMP2 458 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 HOXA9P31269 272 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 MTA1Q13330 715 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 PDK2Q15119 407 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 ERMARDQ5T6L9 678 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 SPRED2Q7Z698 418 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 TAC4Q86UU9 113 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-202ENST00000396308 CARD6Q9BX69 1037 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 TLE6Q9H808 572 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 NMUR1Q9HB89 426 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 TTC7AQ9ULT0 858 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-202ENST00000396308 AP4E1Q9UPM8 1137 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 SZT2Q5T011 3432 aa16.04■□□□□ 0.16
VAMP1-202ENST00000396308 IRAK2O43187 625 aa16.03■□□□□ 0.16
VAMP1-202ENST00000396308 CLASP2O75122 1294 aaKnown RBP16.03■□□□□ 0.16
VAMP1-202ENST00000396308 APOEP02649 317 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms