RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TCP11X1B4DZS4 312 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 IGLV3-25P01717 112 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 ZNF211Q13398 564 aaPredicted RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 CAMK2BQ13554 666 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 AUHQ13825 339 aaKnown RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 PDK2Q15119 407 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 ZNF699Q32M78 642 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 C4orf46Q504U0 113 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 INTS6LQ5JSJ4 861 aaKnown RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 DENND2CQ68D51 928 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 SLC9A4Q6AI14 798 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 BBS12Q6ZW61 710 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 TRMT10CQ7L0Y3 403 aaKnown RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 TAOK1Q7L7X3 1001 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 STRADAQ7RTN6 431 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 ANKS1BQ7Z6G8 1248 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 DPP9Q86TI2 863 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 EXOC3L1Q86VI1 746 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 RHPN2Q8IUC4 686 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 ZDHHC14Q8IZN3 488 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 TTC13Q8NBP0 860 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 GSTCDQ8NEC7 633 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 BEST2Q8NFU1 509 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 UCMAQ8WVF2 138 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 DPF3Q92784 378 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 APBB2Q92870 758 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 FDXACB1Q9BRP7 624 aaPredicted RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 STMN4Q9H169 189 aaPredicted RBP5.59□□□□□ -1.52
VPS41-203ENST00000395969 OCEL1Q9H607 264 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 ETNK1Q9HBU6 452 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 TXLNGQ9NUQ3 528 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 DPP3Q9NY33 737 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 LGALS13Q9UHV8 139 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 DSEQ9UL01 958 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 DOCK3Q8IZD9 2030 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 PTPRSQ13332 1948 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 C2CD4BA6NLJ0 364 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TRAFD1O14545 582 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 NFICP08651 508 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 KRT7P08729 469 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 FUT4P22083 530 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 HOXC13P31276 330 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 COILP38432 576 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 NSFP46459 744 aaKnown RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 IFNAR2P48551 515 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 ACOT2P49753 483 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 OCRLQ01968 901 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SMARCB1Q12824 385 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 CRHR2Q13324 411 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SLC29A2Q14542 456 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SV2CQ496J9 727 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 ZNF667Q5HYK9 610 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 OLFML1Q6UWY5 402 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 CD300LGQ6UXG3 332 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 DAAM2Q86T65 1068 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 LCA5Q86VQ0 697 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 ECHDC2Q86YB7 292 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 CCDC117Q8IWD4 279 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 RNF168Q8IYW5 571 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 PPM1KQ8N3J5 372 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 RIBC1Q8N443 379 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 ANKRD52Q8NB46 1076 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 STON2Q8WXE9 905 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 NTAN1Q96AB6 310 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SLITRK1Q96PX8 696 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 HAPLN3Q96S86 360 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 NDNQ99608 321 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SLX1AQ9BQ83 275 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TRIM62Q9BVG3 475 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 MTMR12Q9C0I1 747 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 ELOVL4Q9GZR5 314 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TLE6Q9H808 572 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 RGS18Q9NS28 235 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SCOCQ9UIL1 159 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TMCO1Q9UM00 188 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TBC1D30Q9Y2I9 924 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 USP3Q9Y6I4 520 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TRIP12Q14669 1992 aaPredicted RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 HELZP42694 1942 aaKnown RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 GOLGA8IPA6NC78 632 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 GOLGA8JA6NMD2 632 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 XPO1O14980 1071 aaKnown RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 B4GALT5O43286 388 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 LMNAP02545 664 aaKnown RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 CXCL10P02778 98 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 CDKN2BP42772 138 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 HUNKP57058 714 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 DSC1Q08554 894 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SFSWAPQ12872 951 aaKnown RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 ILF2Q12905 390 aaKnown RBP5.58□□□□□ -1.52
VPS41-203ENST00000395969 SLC14A2Q15849 920 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 SPDYAQ5MJ70 313 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TMEM63BQ5T3F8 832 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 PM20D1Q6GTS8 502 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 VSTM1Q6UX27 236 aa5.58□□□□□ -1.52
VPS41-203ENST00000395969 TRIM50Q86XT4 487 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms