RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 DARSP14868 501 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SERPINB5P36952 375 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PTPAQ15257 358 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MARC1Q5VT66 337 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ZPBP2Q6X784 338 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 DENND5BQ6ZUT9 1274 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ANKRD27Q96NW4 1050 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MTG1Q9BT17 334 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 RXFP1Q9HBX9 757 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 HEY2Q9UBP5 337 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CAB39Q9Y376 341 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 NEURL4Q96JN8 1562 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 KATNA1O75449 491 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 RHOCP08134 193 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CKBP12277 381 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 IRX1P78414 480 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 RCN1Q15293 331 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF280DQ6N043 979 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 GJB7Q6PEY0 223 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CENPLQ8N0S6 344 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SOCS4Q8WXH5 440 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 STARD8Q92502 1023 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PRMT6Q96LA8 375 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 C1QTNF7Q9BXJ2 289 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CEP44Q9C0F1 390 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ASB7Q9H672 318 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 TMEM131LA2VDJ0 1609 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 NCOA3Q9Y6Q9 1424 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 LOC100653049A0A140TA62 436 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 KRT34O76011 436 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CYP2A7P20853 494 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CRABP2P29373 138 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 EPHX2P34913 555 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SLC16A1P53985 500 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 OTUD4Q01804 1114 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 NAA30Q147X3 362 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PCBP1Q15365 356 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SLC15A2Q16348 729 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 KCNT1Q5JUK3 1230 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MICU2Q8IYU8 434 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 FAM118BQ9BPY3 351 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 BDH2Q9BUT1 245 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SPATC1LQ9H0A9 340 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 DYRK1BQ9Y463 629 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 IL1R1P14778 569 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PTENP60484 403 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ALDH6A1Q02252 535 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 GALNTL6Q49A17 601 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SPANXN3Q5MJ09 141 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 FBXW10Q5XX13 1052 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 C11orf96Q7Z7L8 435 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 GPRC5CQ9NQ84 441 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ACOT9Q9Y305 439 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MAGEA13PA6NCF6 341 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 TRIM66O15016 1216 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 AVPR1AP37288 418 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PTGISQ16647 500 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CTXN3Q4LDR2 81 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CHMP1BQ7LBR1 199 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 NOA1Q8NC60 698 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CPB2Q96IY4 423 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 RGS5O15539 181 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PABPC1P11940 636 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CDC16Q13042 620 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 NT5DC1Q5TFE4 455 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF544Q6NX49 715 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 GPAMQ9HCL2 828 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CXCL11O14625 94 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PROSCO94903 275 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PTPN11Q06124 597 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 NFIAQ12857 509 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MKRN4PQ13434 485 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ZCWPW2Q504Y3 356 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MFSD4BQ5TF39 518 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 INPP5DQ92835 1189 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PRKD2Q9BZL6 878 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 TAS2R13Q9NYV9 303 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PDP2Q9P2J9 529 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 POLLQ9UGP5 575 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PAIP2BQ9ULR5 123 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PADI4Q9UM07 663 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 LTN1O94822 1766 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 ERVK-10P10266 1014 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CYP2F1P24903 491 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 OR1E1P30953 314 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 KRT20P35900 424 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PURAQ00577 322 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 GCNT1Q02742 428 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PGM5Q15124 567 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 RASA2Q15283 850 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MIB1Q86YT6 1006 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CBWD2Q8IUF1 395 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 KCNB2Q92953 911 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 RTFDC1Q9BY42 306 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms