RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 LIPAP38571 399 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 MCM2P49736 904 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 MTHFSP49914 203 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 CLCN2P51788 898 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 RBM5P52756 815 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 EIF4A1P60842 406 aaKnown RBP5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 P3H1Q32P28 736 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 LRRC24Q50LG9 513 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 UBXN11Q5T124 520 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 CFAP161Q6P656 301 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 DPY19L3Q6ZPD9 716 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 LCNL1Q6ZST4 164 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 CAND1Q86VP6 1230 aaKnown RBP5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 GALNT4Q8N4A0 578 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 MYCBPAPQ8TBZ2 947 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 CTHRC1Q96CG8 243 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 KLC2Q9H0B6 622 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 CCDC134Q9H6E4 229 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 PLEKHA2Q9HB19 425 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 FBXO2Q9UK22 296 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 AFG3L2Q9Y4W6 797 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 NOX1Q9Y5S8 564 aa5.66□□□□□ -1.5
HMGB1P10-201ENST00000395823 DYTNA2CJ06 578 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 MUSKO15146 869 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 KLK10O43240 276 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 SPRY2O43597 315 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 CDKL5O76039 1030 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 NDUFA10O95299 355 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 PEPDP12955 493 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 ALADP13716 330 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 DDX6P26196 483 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 THBS4P35443 961 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 GSTM5P46439 218 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 CCT4P50991 539 aaKnown RBP5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 DCAF7P61962 342 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 IRX6P78412 446 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 DCTN1Q14203 1278 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 KCNJ12Q14500 433 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 NFIXQ14938 502 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 ANKRD1Q15327 319 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 CCDC30Q5VVM6 783 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 C16orf89Q6UX73 402 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 TCP11L2Q8N4U5 519 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 LINS1Q8NG48 757 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 SLC2A12Q8TD20 617 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 ADAMTS18Q8TE60 1221 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 SSH3Q8TE77 659 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 NPIPB3Q92617 1050 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 CENPIQ92674 756 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 R3HDM4Q96D70 268 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 NEUROD6Q96NK8 337 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 TOX2Q96NM4 488 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 ADOQ96SZ5 270 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 NRDE2Q9H7Z3 1164 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 NOD2Q9HC29 1040 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 PREBQ9HCU5 417 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 TRIM36Q9NQ86 728 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 TBC1D22BQ9NU19 505 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 LIN7CQ9NUP9 197 aaKnown RBP5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 HSF4Q9ULV5 492 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 ARHGAP26Q9UNA1 814 aa5.65□□□□□ -1.5
HMGB1P10-201ENST00000395823 CCDC196A0A1B0GTZ2 297 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 A6NCN8 305 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 VWC2LB2RUY7 222 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 KIAA0355O15063 1070 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 SPDEFO95238 335 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 ITGB3P05106 788 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 IL6RP08887 468 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 CSF1P09603 554 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 TMEM225BP0DP42 221 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 ACRV1P26436 265 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 CASP6P55212 293 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 FZD5Q13467 585 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 SF3B3Q15393 1217 aaKnown RBP5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 CYP1B1Q16678 543 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 AAK1Q2M2I8 961 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 CTXN3Q4LDR2 81 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 ACAD10Q6JQN1 1059 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 C16orf54Q6UWD8 224 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 DSTYKQ6XUX3 929 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 SYNE3Q6ZMZ3 975 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 TMPRSS6Q8IU80 811 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 FAM71DQ8N9W8 422 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 USP38Q8NB14 1042 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 TBC1D22AQ8WUA7 517 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 RFFLQ8WZ73 363 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 PRR11Q96HE9 360 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 CHCHD6Q9BRQ6 235 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 PHF7Q9BWX1 381 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 PRDM13Q9H4Q3 707 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 IL21RQ9HBE5 538 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 GLOD4Q9HC38 313 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 DKK3Q9UBP4 350 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 AASSQ9UDR5 926 aa5.64□□□□□ -1.51
HMGB1P10-201ENST00000395823 ASAP1Q9ULH1 1129 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms