RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C2CD6Q53TS8 623 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 NAA35Q5VZE5 725 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 TPRG1Q6ZUI0 275 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 FAM183BPQ6ZVS7 135 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
CXCL1-201ENST00000395761 FLCNQ8NFG4 579 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 RNF139Q8WU17 664 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 CPLX3Q8WVH0 158 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 FAM149B1Q96BN6 582 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 IQCDQ96DY2 449 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 NUP58Q9BVL2 599 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 EDEM3Q9BZQ6 932 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 SFMBT1Q9UHJ3 866 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 NAALADL1Q9UQQ1 740 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 COL4A2P08572 1712 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 SLC12A8A0AV02 714 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 LSM8O95777 96 aaKnown RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 CYP1A1P04798 512 aaPredicted RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 NOMO3P69849 1222 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 PRKCQQ04759 706 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 ITPRIPL2Q3MIP1 535 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 CWF19L1Q69YN2 538 aaKnown RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 SPECC1LQ69YQ0 1117 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 OR6B2Q6IFH4 312 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 ERICH1Q86X53 443 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 FMNL3Q8IVF7 1028 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 BBS7Q8IWZ6 715 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 ADGRG2Q8IZP9 1017 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 FBXL6Q8N531 539 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 GOLGA1Q92805 767 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 CHFRQ96EP1 664 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 AGPAT1Q99943 283 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 DDX23Q9BUQ8 820 aaKnown RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 FOXQ1Q9C009 403 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 SYNCQ9H7C4 482 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 ECT2Q9H8V3 914 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 MTF2Q9Y483 593 aaPredicted RBP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.36
CXCL1-201ENST00000395761 TICRRQ7Z2Z1 1910 aa17.31■□□□□ 0.36
CXCL1-201ENST00000395761 STK25O00506 426 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 SART1O43290 800 aaKnown RBP17.3■□□□□ 0.36
CXCL1-201ENST00000395761 MSI1O43347 362 aaKnown RBP17.3■□□□□ 0.36
CXCL1-201ENST00000395761 PI15O43692 258 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 GRAP2O75791 330 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 STC2O76061 302 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 KLKB1P03952 638 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 NCAM1P13591 858 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 GABRB2P47870 512 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 YWHAZP63104 245 aaKnown RBP17.3■□□□□ 0.36
CXCL1-201ENST00000395761 COG7P83436 770 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 ASIC2Q16515 512 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 SFMBT2Q5VUG0 894 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 SYPL2Q5VXT5 272 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 TXNDC11Q6PKC3 985 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 OLFML1Q6UWY5 402 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 HTR3DQ70Z44 454 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 KIAA1958Q8N8K9 716 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 SLC30A5Q8TAD4 765 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 OLIG1Q8TAK6 271 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 IPO4Q8TEX9 1081 aaKnown RBP17.3■□□□□ 0.36
CXCL1-201ENST00000395761 SHDQ96IW2 340 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 SYT11Q9BT88 431 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 OLA1Q9NTK5 396 aaKnown RBP17.3■□□□□ 0.36
CXCL1-201ENST00000395761 AIPL1Q9NZN9 384 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 STRIP2Q9ULQ0 834 aa17.3■□□□□ 0.36
CXCL1-201ENST00000395761 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 SLC9A3R1O14745 358 aaPredicted RBP17.29■□□□□ 0.36
CXCL1-201ENST00000395761 GYPCP04921 128 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 CCDC172P0C7W6 258 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 SKILP12757 684 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 UNGP13051 313 aaPredicted RBP17.29■□□□□ 0.36
CXCL1-201ENST00000395761 GLULP15104 373 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 CTHP32929 405 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 MLLT6P55198 1093 aaPredicted RBP17.29■□□□□ 0.36
CXCL1-201ENST00000395761 SLC6A3Q01959 620 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 GOLGA8FQ08AF8 430 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 GOLGA8DPQ0D2H9 430 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 CLEC16AQ2KHT3 1053 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 MSANTD2Q6P1R3 559 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 RHBDF2Q6PJF5 856 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 Q6ZNB5 142 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 MMS22LQ6ZRQ5 1243 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 XYLT1Q86Y38 959 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 ATP2A3Q93084 1043 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 C18orf8Q96DM3 657 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 HAUS4Q9H6D7 363 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 C8orf33Q9H7E9 229 aaPredicted RBP17.29■□□□□ 0.36
CXCL1-201ENST00000395761 SEPT11Q9NVA2 429 aaKnown RBP17.29■□□□□ 0.36
CXCL1-201ENST00000395761 TBC1D14Q9P2M4 693 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
CXCL1-201ENST00000395761 KANSL1LA0AUZ9 987 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 CYP17A1P05093 508 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 GJA4P35212 333 aa17.28■□□□□ 0.36
CXCL1-201ENST00000395761 VCPP55072 806 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms