RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 OVCH1Q7RTY7 1134 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 SPRED1Q7Z699 444 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 ADGRA1Q86SQ6 560 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 RSPH3Q86UC2 560 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 NOSTRINQ8IVI9 506 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 RPAP2Q8IXW5 612 aaPredicted RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 TTC8Q8TAM2 541 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 WBP1Q96G27 269 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 NUP88Q99567 741 aaPredicted RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 RHOBTB2Q9BYZ6 727 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 PRORYQ9H606 182 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 UCKL1Q9NWZ5 548 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 GOLGA6AQ9NYA3 693 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 ZIM2Q9NZV7 527 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 DPP7Q9UHL4 492 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 ANAPC4Q9UJX5 808 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 ZFR2Q9UPR6 939 aaKnown RBP6.15□□□□□ -1.42
AP3S1-202ENST00000395548 ASB1Q9Y576 335 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 PCDHB7Q9Y5E2 793 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 NUMBLQ9Y6R0 609 aa6.15□□□□□ -1.42
AP3S1-202ENST00000395548 PTPRQQ9UMZ3 2332 aa6.15□□□□□ -1.43
AP3S1-202ENST00000395548 DENND4AQ7Z401 1863 aa6.15□□□□□ -1.43
AP3S1-202ENST00000395548 MYH1P12882 1939 aa6.15□□□□□ -1.43
AP3S1-202ENST00000395548 APC2O95996 2303 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 A0A087X0B3 334 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 TCRBV16S1A1N1A0A5B0 115 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 TBKBP1A7MCY6 615 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 PYCARD-AS1I3L0S3 204 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 FOXP2O15409 715 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 FOXS1O43638 330 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 MPIG6BO95866 241 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 CFBP00751 764 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 MMEP08473 750 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 AKR1B1P15121 316 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 EPCAMP16422 314 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 CR2P20023 1033 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 MC4RP32245 332 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 ADCY8P40145 1251 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 RFX5P48382 616 aaPredicted RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 ALDH7A1P49419 539 aaKnown RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 NEK2P51955 445 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 RRADP55042 308 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 KLRC3Q07444 240 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 ARHGAP1Q07960 439 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 RAPGEF1Q13905 1077 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 HNRNPDQ14103 355 aaKnown RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 EIF4HQ15056 248 aaKnown RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 TAF1BQ53T94 588 aaPredicted RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 CCNI2Q6ZMN8 369 aaPredicted RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 TPRG1Q6ZUI0 275 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 BRAPQ7Z569 592 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 PALM2Q8IXS6 379 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 HIPK4Q8NE63 616 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 CMASQ8NFW8 434 aaPredicted RBP6.14□□□□□ -1.43
AP3S1-202ENST00000395548 PPTC7Q8NI37 304 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 CALML6Q8TD86 181 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 SLC22A17Q8WUG5 538 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 ZNF558Q96NG5 402 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 AMNQ9BXJ7 453 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 OR10A5Q9H207 317 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 MSL2Q9HCI7 577 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 MCM9Q9NXL9 1143 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 SPG21Q9NZD8 308 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 B3GALT1Q9Y5Z6 326 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 RPS6KL1Q9Y6S9 549 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 MYH7BA7E2Y1 1941 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 CLUHO75153 1309 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 IL16Q14005 1332 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 ATMQ13315 3056 aa6.14□□□□□ -1.43
AP3S1-202ENST00000395548 COL6A6A6NMZ7 2263 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 A0A0G2JNJ9 132 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.13□□□□□ -1.43
AP3S1-202ENST00000395548 B4E1Z4 1266 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 AKAP10O43572 662 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 KATNA1O75449 491 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 PAPSS2O95340 614 aaPredicted RBP6.13□□□□□ -1.43
AP3S1-202ENST00000395548 NDUFB10O96000 172 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 ZNF286BP0CG31 522 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 SDHAP31040 664 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 HOXA6P31267 233 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 NFYCQ13952 458 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 BAATQ14032 418 aaPredicted RBP6.13□□□□□ -1.43
AP3S1-202ENST00000395548 LPIN1Q14693 890 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 ARHGAP44Q17R89 818 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 UAP1L1Q3KQV9 507 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 CCDC62Q6P9F0 684 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 MTSS1LQ765P7 747 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 WDR5BQ86VZ2 330 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 IGSF22Q8N9C0 903 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 SVIPQ8NHG7 77 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 CHURC1Q8WUH1 139 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 GAB3Q8WWW8 586 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 ASB15Q8WXK1 588 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 DLG3Q92796 817 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 NEUROD6Q96NK8 337 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 NCOA5Q9HCD5 579 aaKnown RBP6.13□□□□□ -1.43
AP3S1-202ENST00000395548 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms