RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 PLK2Q9NYY3 685 aa20.3■□□□□ 0.84
COL11A2-204ENST00000395194 CALCOCO1Q9P1Z2 691 aa20.3■□□□□ 0.84
COL11A2-204ENST00000395194 NAGPAQ9UK23 515 aa20.3■□□□□ 0.84
COL11A2-204ENST00000395194 ZFHX4Q86UP3 3567 aa20.3■□□□□ 0.84
COL11A2-204ENST00000395194 IGF2RP11717 2491 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 MYL1P05976 194 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 KRT13P13646 458 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 ITPKAP23677 461 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 NTSR1P30989 418 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 KRT85P78386 507 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 RPL6Q02878 288 aaKnown RBP20.29■□□□□ 0.84
COL11A2-204ENST00000395194 GOLGA8FQ08AF8 430 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 GOLGA8DPQ0D2H9 430 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 LYSMD4Q5XG99 296 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 NUDT18Q6ZVK8 323 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 INTS8Q75QN2 995 aaKnown RBP20.29■□□□□ 0.84
COL11A2-204ENST00000395194 TRMT11Q7Z4G4 463 aaKnown RBP20.29■□□□□ 0.84
COL11A2-204ENST00000395194 CHPFQ8IZ52 775 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 EEF2KMTQ96G04 330 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 XPO6Q96QU8 1125 aaKnown RBP20.29■□□□□ 0.84
COL11A2-204ENST00000395194 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.29■□□□□ 0.84
COL11A2-204ENST00000395194 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 RAD54BQ9Y620 910 aa20.29■□□□□ 0.84
COL11A2-204ENST00000395194 PRRT4C9JH25 899 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 CACNG3O60359 315 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 CILPO75339 1184 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 SPINK2P20155 84 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 DPYDQ12882 1025 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 FOXC1Q12948 553 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 PREPLQ4J6C6 727 aaPredicted RBP20.28■□□□□ 0.84
COL11A2-204ENST00000395194 PPP1R26Q5T8A7 1209 aaPredicted RBP20.28■□□□□ 0.84
COL11A2-204ENST00000395194 KIAA1211LQ6NV74 962 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 SYT12Q8IV01 421 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 DEFB124Q8NES8 71 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 DUSP9Q99956 384 aaKnown RBP20.28■□□□□ 0.84
COL11A2-204ENST00000395194 NUSAP1Q9BXS6 441 aaKnown RBP20.28■□□□□ 0.84
COL11A2-204ENST00000395194 SLC6A17Q9H1V8 727 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 GOLPH3LQ9H4A5 285 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 CYP3A43Q9HB55 503 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 CD93Q9NPY3 652 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 PCDHA5Q9Y5H7 936 aa20.28■□□□□ 0.84
COL11A2-204ENST00000395194 A0A1W2PQF6 199 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 MAPK13O15264 365 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 CFIP05156 583 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 HMBSP08397 361 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 KIF11P52732 1056 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 SHC2P98077 582 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 ADAM9Q13443 819 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 BYSLQ13895 437 aaKnown RBP20.27■□□□□ 0.84
COL11A2-204ENST00000395194 SCD5Q86SK9 330 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 SMYD4Q8IYR2 804 aaPredicted RBP20.27■□□□□ 0.84
COL11A2-204ENST00000395194 CCDC150Q8NCX0 1101 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 CACNA2D2Q9NY47 1150 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 EVLQ9UI08 416 aaPredicted RBP20.27■□□□□ 0.84
COL11A2-204ENST00000395194 RASAL2Q9UJF2 1139 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 DNMT3LQ9UJW3 386 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 CYP8B1Q9UNU6 501 aa20.27■□□□□ 0.84
COL11A2-204ENST00000395194 ASPMQ8IZT6 3477 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 TOP3BO95985 862 aaKnown RBP20.26■□□□□ 0.83
COL11A2-204ENST00000395194 ENGP17813 658 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 NDUFV2P19404 249 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 PSMC2P35998 433 aaKnown RBP20.26■□□□□ 0.83
COL11A2-204ENST00000395194 DGKGP49619 791 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 KRBA2Q6ZNG9 492 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 KCNV2Q8TDN2 545 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 IPO4Q8TEX9 1081 aaKnown RBP20.26■□□□□ 0.83
COL11A2-204ENST00000395194 SEMA4DQ92854 862 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 P2RY11Q96G91 374 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 DUSP16Q9BY84 665 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 TMEM8AQ9HCN3 771 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 MARK1Q9P0L2 795 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 WDR35Q9P2L0 1181 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 PILRBQ9UKJ0 227 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 STARD13Q9Y3M8 1113 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 CHD6Q8TD26 2715 aa20.26■□□□□ 0.83
COL11A2-204ENST00000395194 PCDH15Q96QU1 1955 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 WASH3PC4AMC7 463 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 AP5Z1O43299 807 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 STC2O76061 302 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 PLA2G4AP47712 749 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 EFEMP1Q12805 493 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 LMAN2Q12907 356 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 NFIL3Q16649 462 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 SDE2Q6IQ49 451 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 Q6ZNB5 142 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 GUF1Q8N442 669 aaKnown RBP20.25■□□□□ 0.83
COL11A2-204ENST00000395194 HEXIM2Q96MH2 286 aaKnown RBP20.25■□□□□ 0.83
COL11A2-204ENST00000395194 ARID3AQ99856 593 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 GTPBP2Q9BX10 602 aaKnown RBP20.25■□□□□ 0.83
COL11A2-204ENST00000395194 GDPD2Q9HCC8 539 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 PNPLA8Q9NP80 782 aa20.25■□□□□ 0.83
COL11A2-204ENST00000395194 AKAP13Q12802 2813 aa20.24■□□□□ 0.83
COL11A2-204ENST00000395194 IGHV1OR15-9A0A0B4J2B8 117 aa20.24■□□□□ 0.83
COL11A2-204ENST00000395194 FAM237AA0A1B0GTK4 181 aa20.24■□□□□ 0.83
COL11A2-204ENST00000395194 RALAP11233 206 aa20.24■□□□□ 0.83
COL11A2-204ENST00000395194 RPL13P26373 211 aaKnown RBP20.24■□□□□ 0.83
COL11A2-204ENST00000395194 KRT39Q6A163 491 aa20.24■□□□□ 0.83
COL11A2-204ENST00000395194 KLHDC10Q6PID8 442 aa20.24■□□□□ 0.83
COL11A2-204ENST00000395194 CCDC186Q7Z3E2 898 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms