RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
RTN1-203ENST00000395090 TMEM240Q5SV17 173 aa12□□□□□ -0.49
RTN1-203ENST00000395090 LIN9Q5TKA1 542 aa12□□□□□ -0.49
RTN1-203ENST00000395090 OVOS1Q6IE37 1185 aa12□□□□□ -0.49
RTN1-203ENST00000395090 MMS22LQ6ZRQ5 1243 aa12□□□□□ -0.49
RTN1-203ENST00000395090 OTOP2Q7RTS6 562 aa12□□□□□ -0.49
RTN1-203ENST00000395090 TMEM110Q86TL2 294 aa12□□□□□ -0.49
RTN1-203ENST00000395090 CMTR2Q8IYT2 770 aaKnown RBP12□□□□□ -0.49
RTN1-203ENST00000395090 CACTIN-AS1Q8N1I8 211 aa12□□□□□ -0.49
RTN1-203ENST00000395090 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
RTN1-203ENST00000395090 UBA3Q8TBC4 463 aa12□□□□□ -0.49
RTN1-203ENST00000395090 SLC2A14Q8TDB8 520 aa12□□□□□ -0.49
RTN1-203ENST00000395090 RNF34Q969K3 372 aa12□□□□□ -0.49
RTN1-203ENST00000395090 C18orf8Q96DM3 657 aa12□□□□□ -0.49
RTN1-203ENST00000395090 BTBD6Q96KE9 485 aa12□□□□□ -0.49
RTN1-203ENST00000395090 ALPK3Q96L96 1907 aa12□□□□□ -0.49
RTN1-203ENST00000395090 CPXM1Q96SM3 734 aa12□□□□□ -0.49
RTN1-203ENST00000395090 SYT15Q9BQS2 421 aa12□□□□□ -0.49
RTN1-203ENST00000395090 HTATIP2Q9BUP3 242 aa12□□□□□ -0.49
RTN1-203ENST00000395090 DUSP16Q9BY84 665 aa12□□□□□ -0.49
RTN1-203ENST00000395090 ADAM19Q9H013 955 aa12□□□□□ -0.49
RTN1-203ENST00000395090 MUC3BQ9H195 1237 aa12□□□□□ -0.49
RTN1-203ENST00000395090 ZNF576Q9H609 170 aa12□□□□□ -0.49
RTN1-203ENST00000395090 CTTNBP2NLQ9P2B4 639 aa12□□□□□ -0.49
RTN1-203ENST00000395090 HESX1Q9UBX0 185 aa12□□□□□ -0.49
RTN1-203ENST00000395090 SHISA8B8ZZ34 492 aa12□□□□□ -0.49
RTN1-203ENST00000395090 LILRB5O75023 590 aa12□□□□□ -0.49
RTN1-203ENST00000395090 CELA2BP08218 269 aaPredicted RBP12□□□□□ -0.49
RTN1-203ENST00000395090 CCDC130P13994 396 aa12□□□□□ -0.49
RTN1-203ENST00000395090 PRLRP16471 622 aa12□□□□□ -0.49
RTN1-203ENST00000395090 BCAT1P54687 386 aa12□□□□□ -0.49
RTN1-203ENST00000395090 PSMC1P62191 440 aaKnown RBP12□□□□□ -0.49
RTN1-203ENST00000395090 YWHAHQ04917 246 aaPredicted RBP12□□□□□ -0.49
RTN1-203ENST00000395090 ELAVL2Q12926 359 aaKnown RBP12□□□□□ -0.49
RTN1-203ENST00000395090 PDCLQ13371 301 aa12□□□□□ -0.49
RTN1-203ENST00000395090 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
RTN1-203ENST00000395090 GOLGA7BQ2TAP0 167 aa12□□□□□ -0.49
RTN1-203ENST00000395090 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
RTN1-203ENST00000395090 LYPD4Q6UWN0 246 aa12□□□□□ -0.49
RTN1-203ENST00000395090 ADAMTSL4Q6UY14 1074 aa12□□□□□ -0.49
RTN1-203ENST00000395090 C7orf61Q8IZ16 206 aa12□□□□□ -0.49
RTN1-203ENST00000395090 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
RTN1-203ENST00000395090 C11orf70Q9BRQ4 267 aa12□□□□□ -0.49
RTN1-203ENST00000395090 NUP85Q9BW27 656 aa12□□□□□ -0.49
RTN1-203ENST00000395090 B3GNT5Q9BYG0 378 aa12□□□□□ -0.49
RTN1-203ENST00000395090 GPR62Q9BZJ7 368 aa12□□□□□ -0.49
RTN1-203ENST00000395090 MRPL47Q9HD33 250 aaKnown RBP12□□□□□ -0.49
RTN1-203ENST00000395090 PARVAQ9NVD7 372 aa12□□□□□ -0.49
RTN1-203ENST00000395090 WDR35Q9P2L0 1181 aa12□□□□□ -0.49
RTN1-203ENST00000395090 STRIP2Q9ULQ0 834 aa12□□□□□ -0.49
RTN1-203ENST00000395090 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.49
RTN1-203ENST00000395090 MYH10P35580 1976 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 FAM170AA1A519 330 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 M0R082 166 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 TBC1D4O60343 1298 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 BUB1BO60566 1050 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 AMPD1P23109 780 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 TKTP29401 623 aaKnown RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 HTRA4P83105 476 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 BST2Q10589 180 aaKnown RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 MAPRE1Q15691 268 aaKnown RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 C2CD6Q53TS8 623 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 MDH1BQ5I0G3 518 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 FAM171A1Q5VUB5 890 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 PMF1Q6P1K2 205 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 TMCO2Q7Z6W1 182 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 RNF168Q8IYW5 571 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 SYCE1Q8N0S2 351 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 MSANTD4Q8NCY6 345 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 C3orf20Q8ND61 904 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 OR10T2Q8NGX3 314 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 ZNF417Q8TAU3 575 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 HERVK_113Q902F9 699 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 MCRS1Q96EZ8 462 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 PCED1BQ96HM7 432 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 ZNF587Q96SQ5 575 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 UBXN6Q9BZV1 441 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 MIS12Q9H081 205 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 L2HGDHQ9H9P8 463 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 CHORDC1Q9UHD1 332 aaPredicted RBP11.99□□□□□ -0.49
RTN1-203ENST00000395090 SOX13Q9UN79 622 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 SCINQ9Y6U3 715 aa11.99□□□□□ -0.49
RTN1-203ENST00000395090 SIGLEC16A6NMB1 481 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 NT5C1B-RDH14C9J2C7 533 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 TULP2O00295 520 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 GJB5O95377 273 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 ERBB2P04626 1255 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 ADORA2BP29275 332 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 SNX16P57768 344 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 AMPD2Q01433 879 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 TUBB2AQ13885 445 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 CCDC142Q17RM4 750 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 RPS26P11Q5JNZ5 115 aaPredicted RBP11.98□□□□□ -0.49
RTN1-203ENST00000395090 C11orf63Q6NUN7 778 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 FUT10Q6P4F1 479 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 KCNT2Q6UVM3 1135 aa11.98□□□□□ -0.49
RTN1-203ENST00000395090 NT5DC3Q86UY8 548 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms