RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 SCUBE2Q9NQ36 999 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 WSB2Q9NYS7 404 aaPredicted RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 KIAA1522Q9P206 1035 aaPredicted RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 USP36Q9P275 1121 aaKnown RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 FNDC3AQ9Y2H6 1198 aaKnown RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 ATP8B3O60423 1300 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 MEI4A8MW99 385 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 KCNJ18B7U540 433 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 GFRA2O00451 464 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 BEST1O76090 585 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 DKK1O94907 266 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 NCAM1P13591 858 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 TXLNAP40222 546 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 DGKGP49619 791 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 CYP24A1Q07973 514 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 FUT11Q495W5 492 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 FUKQ8N0W3 1084 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 SETD7Q8WTS6 366 aaKnown RBP16.73■□□□□ 0.27
SNCA-205ENST00000394991 ELMO3Q96BJ8 720 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 SMARCD1Q96GM5 515 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 SMOQ99835 787 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 GPR174Q9BXC1 333 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 SDCBP2Q9H190 292 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 GAREM1Q9H706 876 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 KRT82Q9NSB4 513 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 COMMD8Q9NX08 183 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 WDR35Q9P2L0 1181 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 DKK4Q9UBT3 224 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 STON1Q9Y6Q2 735 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 KNTC1P50748 2209 aa16.73■□□□□ 0.27
SNCA-205ENST00000394991 TGFB1I1O43294 461 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 CILPO75339 1184 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 AP1G2O75843 785 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 ATXN1LP0C7T5 689 aaKnown RBP16.72■□□□□ 0.27
SNCA-205ENST00000394991 ZNF883P0CG24 379 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 DCAF12L1Q5VU92 463 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
SNCA-205ENST00000394991 METTL3Q86U44 580 aaKnown RBP16.72■□□□□ 0.27
SNCA-205ENST00000394991 BHMTQ93088 406 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 CRELD1Q96HD1 420 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 MKRN2Q9H000 416 aaKnown RBP16.72■□□□□ 0.27
SNCA-205ENST00000394991 MIR1-1HGQ9H1L0 117 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 PRDM16Q9HAZ2 1276 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 AGPAT3Q9NRZ7 376 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 TM7SF3Q9NS93 570 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 OSER1Q9NX31 292 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 PLK2Q9NYY3 685 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
SNCA-205ENST00000394991 MDM4O15151 490 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 CLIC2O15247 247 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 CCDC130P13994 396 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 ATICP31939 592 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 MATKP42679 507 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 CYP2J2P51589 502 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 TRPC3Q13507 836 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 SCARA5Q6ZMJ2 495 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 STXBP4Q6ZWJ1 553 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 GPRIN1Q7Z2K8 1008 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 PLEKHO2Q8TD55 490 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 CYLDQ9NQC7 956 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 ITM2CQ9NQX7 267 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 ASH1LQ9NR48 2969 aaKnown RBP16.71■□□□□ 0.27
SNCA-205ENST00000394991 FBXO10Q9UK96 956 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 BTBD3Q9Y2F9 522 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 SLCO1B1Q9Y6L6 691 aa16.71■□□□□ 0.27
SNCA-205ENST00000394991 MUC22E2RYF6 1773 aaPredicted RBP16.7■□□□□ 0.26
SNCA-205ENST00000394991 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
SNCA-205ENST00000394991 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNCA-205ENST00000394991 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
SNCA-205ENST00000394991 CER1O95813 267 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 IL12RB1P42701 662 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 CYP4F3Q08477 520 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 ORC1Q13415 861 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 CAMK2BQ13554 666 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 HLA-BQ31612 363 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 Q6ZNB5 142 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 DBX2Q6ZNG2 339 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 PDILTQ8N807 584 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 CADM4Q8NFZ8 388 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 C1orf216Q8TAB5 229 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 SYAP1Q96A49 352 aaPredicted RBP16.7■□□□□ 0.26
SNCA-205ENST00000394991 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 CSNK1G1Q9HCP0 422 aa16.7■□□□□ 0.26
SNCA-205ENST00000394991 TLR8Q9NR97 1041 aaKnown RBP16.7■□□□□ 0.26
SNCA-205ENST00000394991 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
SNCA-205ENST00000394991 PTPRQQ9UMZ3 2332 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 TRABD2BA6NFA1 517 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 ATP5C1P36542 298 aaKnown RBP16.69■□□□□ 0.26
SNCA-205ENST00000394991 CASP4P49662 377 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 TPMTP51580 245 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 MAP3K7CLP57077 242 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 CEBPZQ03701 1054 aaKnown RBP16.69■□□□□ 0.26
SNCA-205ENST00000394991 ENPP2Q13822 863 aa16.69■□□□□ 0.26
SNCA-205ENST00000394991 STARD3Q14849 445 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms